Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.84□□□□□ -1.47
NFKB1P19838 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.84□□□□□ -1.47
NFKB1P19838 AC090615.1-201ENST00000577519 154 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 MIR3672-201ENST00000584290 82 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AC104662.1-201ENST00000604448 511 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AL499605.1-201ENST00000604628 403 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 PRR13P7-201ENST00000605538 430 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 AL031666.3-201ENST00000609320 1006 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AP001486.3-201ENST00000615334 372 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 AL596245.1-201ENST00000618994 362 ntBASIC5.84□□□□□ -1.47
NFKB1P19838 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.84□□□□□ -1.47
NFKB1P19838 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NFKB1P19838 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.84□□□□□ -1.47
NFKB1P19838 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
NFKB1P19838 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
NFKB1P19838 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NFKB1P19838 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NFKB1P19838 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NFKB1P19838 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
NFKB1P19838 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NFKB1P19838 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.83□□□□□ -1.48
NFKB1P19838 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 AL159987.1-201ENST00000347911 293 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 Y_RNA.364-201ENST00000365532 101 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 RNU11-201ENST00000387069 134 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 UBE2V1P2-201ENST00000397758 440 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 Y_RNA.646-201ENST00000410980 101 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AL591848.1-201ENST00000413092 322 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.83□□□□□ -1.48
NFKB1P19838 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
NFKB1P19838 OR2AS1P-201ENST00000427827 319 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 SUMO1P2-201ENST00000452524 304 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC016724.1-201ENST00000453215 421 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AL133244.1-201ENST00000456007 258 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC012123.2-201ENST00000485809 248 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC020893.1-201ENST00000502452 580 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 AC079140.5-201ENST00000507882 310 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 RNU7-51P-201ENST00000516560 62 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AP000648.1-201ENST00000529682 397 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC005363.1-201ENST00000530779 351 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 AC092121.1-201ENST00000569452 202 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.83□□□□□ -1.48
NFKB1P19838 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.83□□□□□ -1.48
NFKB1P19838 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.83□□□□□ -1.48
NFKB1P19838 MIR4260-201ENST00000583107 67 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC023043.2-201ENST00000589678 1026 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.83□□□□□ -1.48
NFKB1P19838 AL360012.1-201ENST00000602813 131 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.83□□□□□ -1.48
NFKB1P19838 AC007485.1-201ENST00000616755 206 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 AL442639.1-201ENST00000625030 1899 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
NFKB1P19838 AC004656.1-201ENST00000568479 4951 ntBASIC5.83□□□□□ -1.48
NFKB1P19838 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NFKB1P19838 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.82□□□□□ -1.48
NFKB1P19838 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NFKB1P19838 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NFKB1P19838 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 RNU6-82P-201ENST00000363970 107 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NFKB1P19838 RNU1-136P-201ENST00000384181 164 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 Y_RNA.574-201ENST00000384766 95 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 MIR19A-201ENST00000384878 82 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 AL360182.1-201ENST00000397433 468 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.82□□□□□ -1.48
NFKB1P19838 RPL24P2-201ENST00000421023 475 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms