Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.59□□□□□ -1.51
NID1P14543 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 SNORD58B-201ENST00000607313 66 ntBASIC5.59□□□□□ -1.51
NID1P14543 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.59□□□□□ -1.51
NID1P14543 AL445363.3-201ENST00000623080 671 ntBASIC5.59□□□□□ -1.51
NID1P14543 AC073488.6-201ENST00000632293 754 ntBASIC5.59□□□□□ -1.51
NID1P14543 U6.104-201ENST00000637979 90 ntBASIC5.59□□□□□ -1.51
NID1P14543 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
NID1P14543 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.59□□□□□ -1.51
NID1P14543 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.59□□□□□ -1.52
NID1P14543 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NID1P14543 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
NID1P14543 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.59□□□□□ -1.52
NID1P14543 AC022325.1-201ENST00000502748 2199 ntBASIC5.59□□□□□ -1.52
NID1P14543 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
NID1P14543 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NID1P14543 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NID1P14543 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.52
NID1P14543 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
NID1P14543 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.58□□□□□ -1.52
NID1P14543 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.58□□□□□ -1.52
NID1P14543 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.58□□□□□ -1.52
NID1P14543 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NID1P14543 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.58□□□□□ -1.52
NID1P14543 Y_RNA.180-201ENST00000363867 113 ntBASIC5.58□□□□□ -1.52
NID1P14543 Y_RNA.234-201ENST00000364409 97 ntBASIC5.58□□□□□ -1.52
NID1P14543 Y_RNA.785-201ENST00000384290 109 ntBASIC5.58□□□□□ -1.52
NID1P14543 MT-TW-201ENST00000387382 68 ntBASIC5.58□□□□□ -1.52
NID1P14543 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
NID1P14543 MTCO3P19-201ENST00000415864 321 ntBASIC5.58□□□□□ -1.52
NID1P14543 BX284632.2-201ENST00000421091 399 ntBASIC5.58□□□□□ -1.52
NID1P14543 RPL7AP14-201ENST00000424041 802 ntBASIC5.58□□□□□ -1.52
NID1P14543 USMG5P1-201ENST00000425964 177 ntBASIC5.58□□□□□ -1.52
NID1P14543 FTH1P1-201ENST00000437933 532 ntBASIC5.58□□□□□ -1.52
NID1P14543 RPL5P7-201ENST00000444235 813 ntBASIC5.58□□□□□ -1.52
NID1P14543 AL359955.2-201ENST00000445380 353 ntBASIC5.58□□□□□ -1.52
NID1P14543 CBX1P2-201ENST00000453841 458 ntBASIC5.58□□□□□ -1.52
NID1P14543 SETP20-201ENST00000457046 852 ntBASIC5.58□□□□□ -1.52
NID1P14543 AC011476.1-201ENST00000466725 307 ntBASIC5.58□□□□□ -1.52
NID1P14543 RPL12P30-201ENST00000488389 499 ntBASIC5.58□□□□□ -1.52
NID1P14543 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.58□□□□□ -1.52
NID1P14543 AC009901.1-201ENST00000506703 541 ntBASIC5.58□□□□□ -1.52
NID1P14543 RPS27AP18-201ENST00000515536 459 ntBASIC5.58□□□□□ -1.52
NID1P14543 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.58□□□□□ -1.52
NID1P14543 OR5D17P-201ENST00000531492 978 ntBASIC5.58□□□□□ -1.52
NID1P14543 HMGB1P42-201ENST00000532126 553 ntBASIC5.58□□□□□ -1.52
NID1P14543 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.58□□□□□ -1.52
NID1P14543 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.58□□□□□ -1.52
NID1P14543 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.58□□□□□ -1.52
NID1P14543 HMGB3P26-201ENST00000560051 582 ntBASIC5.58□□□□□ -1.52
NID1P14543 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.58□□□□□ -1.52
NID1P14543 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.58□□□□□ -1.52
NID1P14543 AC006254.3-201ENST00000603353 884 ntBASIC5.58□□□□□ -1.52
NID1P14543 AL512329.2-201ENST00000607350 548 ntBASIC5.58□□□□□ -1.52
NID1P14543 DUSP12P1-201ENST00000612874 516 ntBASIC5.58□□□□□ -1.52
NID1P14543 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.58□□□□□ -1.52
NID1P14543 AL512643.1-201ENST00000635735 524 ntBASIC5.58□□□□□ -1.52
NID1P14543 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.58□□□□□ -1.52
NID1P14543 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NID1P14543 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NID1P14543 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NID1P14543 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NID1P14543 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC5.57□□□□□ -1.52
NID1P14543 TRIM51GP-201ENST00000534741 1350 ntBASIC5.57□□□□□ -1.52
NID1P14543 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.57□□□□□ -1.52
NID1P14543 SNORA21-201ENST00000362423 132 ntBASIC5.57□□□□□ -1.52
NID1P14543 RNU6-1287P-201ENST00000362914 107 ntBASIC5.57□□□□□ -1.52
NID1P14543 RNU6-746P-201ENST00000384112 109 ntBASIC5.57□□□□□ -1.52
NID1P14543 Y_RNA.483-201ENST00000384380 101 ntBASIC5.57□□□□□ -1.52
NID1P14543 RNU6-441P-201ENST00000384545 106 ntBASIC5.57□□□□□ -1.52
NID1P14543 RNU6-1060P-201ENST00000384664 107 ntBASIC5.57□□□□□ -1.52
NID1P14543 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NID1P14543 RNA5SP219-201ENST00000390940 113 ntBASIC5.57□□□□□ -1.52
NID1P14543 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.57□□□□□ -1.52
NID1P14543 RNU4-46P-201ENST00000410818 138 ntBASIC5.57□□□□□ -1.52
NID1P14543 MYL6P5-201ENST00000412707 459 ntBASIC5.57□□□□□ -1.52
NID1P14543 AL096829.1-201ENST00000413677 457 ntBASIC5.57□□□□□ -1.52
NID1P14543 RPL35AP31-201ENST00000418340 337 ntBASIC5.57□□□□□ -1.52
NID1P14543 RPL31P45-201ENST00000419532 356 ntBASIC5.57□□□□□ -1.52
NID1P14543 AL139095.3-201ENST00000419672 1203 ntBASIC5.57□□□□□ -1.52
NID1P14543 AL590135.1-201ENST00000422215 156 ntBASIC5.57□□□□□ -1.52
NID1P14543 AC130360.1-201ENST00000425489 1117 ntBASIC5.57□□□□□ -1.52
NID1P14543 AC016027.4-201ENST00000450866 277 ntBASIC5.57□□□□□ -1.52
NID1P14543 HMGB3P21-201ENST00000452483 547 ntBASIC5.57□□□□□ -1.52
NID1P14543 AC002553.3-201ENST00000453002 341 ntBASIC5.57□□□□□ -1.52
NID1P14543 RPS23P3-201ENST00000470993 430 ntBASIC5.57□□□□□ -1.52
NID1P14543 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.57□□□□□ -1.52
NID1P14543 RPL21P93-201ENST00000480465 489 ntBASIC5.57□□□□□ -1.52
NID1P14543 AC022215.1-201ENST00000481770 362 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms