Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TOMM20P4-201ENST00000427861 435 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP2AP11388 TXNP6-201ENST00000510190 310 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP2AP11388 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.51□□□□□ -1.69
TOP2AP11388 AC009101.1-201ENST00000568135 242 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 AC009163.5-201ENST00000575421 637 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 OOSP1P2-201ENST00000579644 351 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 AC010620.2-201ENST00000600135 313 ntBASIC4.51□□□□□ -1.69
TOP2AP11388 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.5□□□□□ -1.69
TOP2AP11388 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TOP2AP11388 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.5□□□□□ -1.69
TOP2AP11388 AL359511.1-201ENST00000402970 211 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 AC003685.2-201ENST00000422795 395 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.5□□□□□ -1.69
TOP2AP11388 RPL23AP23-201ENST00000452590 471 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 AC016687.1-201ENST00000482574 353 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.5□□□□□ -1.69
TOP2AP11388 MIR7843-201ENST00000622274 79 ntBASIC4.5□□□□□ -1.69
TOP2AP11388 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.49□□□□□ -1.69
TOP2AP11388 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
TOP2AP11388 AL590399.6-201ENST00000446396 307 ntBASIC4.49□□□□□ -1.69
TOP2AP11388 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.49□□□□□ -1.69
TOP2AP11388 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.49□□□□□ -1.69
TOP2AP11388 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP2AP11388 AL133271.1-201ENST00000538229 291 ntBASIC4.49□□□□□ -1.69
TOP2AP11388 AC098826.3-201ENST00000603823 466 ntBASIC4.49□□□□□ -1.69
TOP2AP11388 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.49□□□□□ -1.69
TOP2AP11388 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.49□□□□□ -1.69
TOP2AP11388 RNVU1-3-201ENST00000364313 161 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 MIR764-201ENST00000390811 85 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 BTF3P7-201ENST00000407097 488 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 AL139415.2-201ENST00000431968 163 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.48□□□□□ -1.69
TOP2AP11388 AC112184.1-201ENST00000505179 312 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.48□□□□□ -1.69
TOP2AP11388 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.48□□□□□ -1.69
TOP2AP11388 AC078899.5-201ENST00000612475 178 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 AL353684.1-201ENST00000622677 1120 ntBASIC4.48□□□□□ -1.69
TOP2AP11388 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
TOP2AP11388 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TOP2AP11388 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.48□□□□□ -1.69
TOP2AP11388 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.48□□□□□ -1.69
TOP2AP11388 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
TOP2AP11388 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TOP2AP11388 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP2AP11388 GTF2H2B-203ENST00000508065 1432 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.47□□□□□ -1.69
TOP2AP11388 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
TOP2AP11388 RNU6-618P-201ENST00000363518 112 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 RNA5SP425-201ENST00000410336 112 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 RNU4-53P-201ENST00000410828 140 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 NANOGP5-201ENST00000424456 877 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 AL356320.1-201ENST00000429616 163 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.47□□□□□ -1.69
TOP2AP11388 WASF1P1-201ENST00000447560 1131 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 AP002884.2-201ENST00000471647 395 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 RPL36AP51-201ENST00000487216 318 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.47□□□□□ -1.69
TOP2AP11388 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.47□□□□□ -1.69
TOP2AP11388 AC005921.1-201ENST00000510589 286 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 NPM1P35-201ENST00000533043 868 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 OR8L1P-201ENST00000534005 955 ntBASIC4.47□□□□□ -1.69
TOP2AP11388 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.47□□□□□ -1.69
TOP2AP11388 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP2AP11388 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP2AP11388 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TOP2AP11388 MIR148B-201ENST00000362252 99 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 RNU1-100P-201ENST00000365255 165 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.46□□□□□ -1.69
TOP2AP11388 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.46□□□□□ -1.69
TOP2AP11388 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.46□□□□□ -1.69
TOP2AP11388 UBE2D3P1-201ENST00000436669 444 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
TOP2AP11388 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.46□□□□□ -1.69
TOP2AP11388 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.46□□□□□ -1.69
TOP2AP11388 AC128657.1-201ENST00000549459 145 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.46□□□□□ -1.69
TOP2AP11388 AC068722.2-201ENST00000618734 544 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 AC241585.2-209ENST00000638217 143 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 PROS2P-201ENST00000474651 1951 ntBASIC4.46□□□□□ -1.69
TOP2AP11388 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TOP2AP11388 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TOP2AP11388 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOP2AP11388 AC087565.3-202ENST00000642085 1603 ntBASIC4.46□□□□□ -1.7
TOP2AP11388 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TOP2AP11388 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP2AP11388 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TOP2AP11388 MIR181B1-201ENST00000385240 110 ntBASIC4.46□□□□□ -1.7
TOP2AP11388 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TOP2AP11388 SEPT7P2-202ENST00000398921 823 ntBASIC4.46□□□□□ -1.7
TOP2AP11388 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.46□□□□□ -1.7
TOP2AP11388 MRPL50P4-201ENST00000446432 475 ntBASIC4.46□□□□□ -1.7
TOP2AP11388 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.46□□□□□ -1.7
TOP2AP11388 Y_RNA.638-201ENST00000459374 113 ntBASIC4.46□□□□□ -1.7
TOP2AP11388 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.46□□□□□ -1.7
TOP2AP11388 U4.3-201ENST00000621047 82 ntBASIC4.46□□□□□ -1.7
TOP2AP11388 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms