Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 RNU6-1243P-201ENST00000364028 107 ntBASIC2.69□□□□□ -1.98
CD28P10747 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 U3.19-201ENST00000390893 196 ntBASIC2.69□□□□□ -1.98
CD28P10747 SNORA48.2-201ENST00000390926 124 ntBASIC2.69□□□□□ -1.98
CD28P10747 ATF1P1-201ENST00000406040 927 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 AC017079.2-201ENST00000416102 485 ntBASIC2.69□□□□□ -1.98
CD28P10747 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 YWHAZP8-201ENST00000436935 731 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC091862.1-201ENST00000438016 1100 ntBASIC2.69□□□□□ -1.98
CD28P10747 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 RPS26P56-201ENST00000444468 240 ntBASIC2.69□□□□□ -1.98
CD28P10747 AL590399.6-201ENST00000446396 307 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 AC115115.1-201ENST00000449927 248 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 HMGB3P30-201ENST00000457863 606 ntBASIC2.69□□□□□ -1.98
CD28P10747 RPL5P24-201ENST00000463742 885 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC078857.1-201ENST00000469870 667 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC092451.1-201ENST00000480211 153 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC093663.1-201ENST00000497190 394 ntBASIC2.69□□□□□ -1.98
CD28P10747 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 RPL7L1P13-201ENST00000511702 739 ntBASIC2.69□□□□□ -1.98
CD28P10747 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 AC027338.1-201ENST00000514840 825 ntBASIC2.69□□□□□ -1.98
CD28P10747 RNU6-579P-201ENST00000516879 102 ntBASIC2.69□□□□□ -1.98
CD28P10747 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 AL121576.1-201ENST00000556055 276 ntBASIC2.69□□□□□ -1.98
CD28P10747 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.69□□□□□ -1.98
CD28P10747 AC124283.4-201ENST00000581815 456 ntBASIC2.69□□□□□ -1.98
CD28P10747 BNIP3P4-201ENST00000604946 565 ntBASIC2.69□□□□□ -1.98
CD28P10747 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC2.69□□□□□ -1.98
CD28P10747 AL354976.1-201ENST00000613843 387 ntBASIC2.69□□□□□ -1.98
CD28P10747 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.69□□□□□ -1.98
CD28P10747 AL109659.3-201ENST00000624985 950 ntBASIC2.69□□□□□ -1.98
CD28P10747 GABPAP-201ENST00000419271 1356 ntBASIC2.69□□□□□ -1.98
CD28P10747 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD28P10747 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CD28P10747 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CD28P10747 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD28P10747 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.68□□□□□ -1.98
CD28P10747 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.68□□□□□ -1.98
CD28P10747 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.68□□□□□ -1.98
CD28P10747 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD28P10747 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CD28P10747 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CD28P10747 RNU6-328P-201ENST00000390887 106 ntBASIC2.68□□□□□ -1.98
CD28P10747 U3.39-201ENST00000408569 239 ntBASIC2.68□□□□□ -1.98
CD28P10747 AL121882.1-201ENST00000422893 417 ntBASIC2.68□□□□□ -1.98
CD28P10747 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.68□□□□□ -1.98
CD28P10747 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 MTCO1P43-201ENST00000431831 488 ntBASIC2.68□□□□□ -1.98
CD28P10747 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.68□□□□□ -1.98
CD28P10747 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 AC004865.1-201ENST00000442276 1003 ntBASIC2.68□□□□□ -1.98
CD28P10747 RAB11AP1-201ENST00000442978 646 ntBASIC2.68□□□□□ -1.98
CD28P10747 RPS26P30-201ENST00000443431 335 ntBASIC2.68□□□□□ -1.98
CD28P10747 RPL23AP15-201ENST00000450202 459 ntBASIC2.68□□□□□ -1.98
CD28P10747 GTF2IP12-201ENST00000456547 356 ntBASIC2.68□□□□□ -1.98
CD28P10747 AL136097.1-201ENST00000456945 913 ntBASIC2.68□□□□□ -1.98
CD28P10747 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 RPL7P47-201ENST00000497299 556 ntBASIC2.68□□□□□ -1.98
CD28P10747 AC078918.1-201ENST00000498515 228 ntBASIC2.68□□□□□ -1.98
CD28P10747 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 AC104108.1-201ENST00000509930 412 ntBASIC2.68□□□□□ -1.98
CD28P10747 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 MTCO1P30-201ENST00000515244 580 ntBASIC2.68□□□□□ -1.98
CD28P10747 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.68□□□□□ -1.98
CD28P10747 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.68□□□□□ -1.98
CD28P10747 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 OSBPL9P3-201ENST00000534523 595 ntBASIC2.68□□□□□ -1.98
CD28P10747 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD28P10747 UBE2NP1-201ENST00000545592 458 ntBASIC2.68□□□□□ -1.98
CD28P10747 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.68□□□□□ -1.98
CD28P10747 EIF5A2P1-201ENST00000564027 460 ntBASIC2.68□□□□□ -1.98
CD28P10747 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.68□□□□□ -1.98
CD28P10747 MTCYBP28-201ENST00000566728 1132 ntBASIC2.68□□□□□ -1.98
CD28P10747 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.68□□□□□ -1.98
CD28P10747 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.68□□□□□ -1.98
CD28P10747 AC245100.7-201ENST00000609678 442 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms