Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AL118496.1-201ENST00000440201 1812 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 AC024560.2-201ENST00000507981 1497 ntBASIC6.92□□□□□ -1.3
CSB-PGBD3P0DP91 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.422-201ENST00000384054 114 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.481-201ENST00000384373 102 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 DNAJC19P7-201ENST00000428811 344 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 RPL31P35-201ENST00000431058 377 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC016712.1-201ENST00000431088 378 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 KNOP1P3-201ENST00000446933 426 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AL590639.1-201ENST00000456484 337 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 MTND1P3-201ENST00000484956 952 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 PPP1R11P1-201ENST00000486095 376 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 RPL36AP51-201ENST00000487216 318 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC005726.1-201ENST00000494679 427 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 RPL30P11-201ENST00000495304 339 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 MTND4LP22-201ENST00000508209 276 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC022861.1-201ENST00000522981 663 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AP006289.1-201ENST00000538089 277 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC026470.2-201ENST00000561492 181 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 VN1R107P-201ENST00000601784 209 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC244107.2-201ENST00000611773 76 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC123768.4-201ENST00000616244 701 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC090971.5-201ENST00000621102 293 ntBASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CSB-PGBD3P0DP91 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AP000756.2-201ENST00000624168 2567 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.128-201ENST00000363391 112 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.157-201ENST00000363638 102 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 Y_RNA.159-201ENST00000363674 87 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 RNU1-59P-201ENST00000364829 162 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 RNU6-282P-201ENST00000365357 103 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 SNORA4.3-201ENST00000365564 137 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 SNORA66-201ENST00000384792 133 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC009310.1-201ENST00000414414 451 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC119751.6-201ENST00000416712 186 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC073465.2-201ENST00000440938 498 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 LINC02210-201ENST00000444561 288 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC073264.2-201ENST00000448886 166 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC006480.1-201ENST00000449887 378 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 RPS15AP36-201ENST00000492022 382 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC017037.1-201ENST00000508460 471 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 SCARNA20.4-201ENST00000516969 131 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 HMGN1P30-201ENST00000589286 268 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC008638.3-201ENST00000603341 463 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 U1.25-201ENST00000614085 162 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AL732618.1-201ENST00000623251 301 ntBASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CSB-PGBD3P0DP91 AC026951.1-201ENST00000559530 2459 ntBASIC6.9□□□□□ -1.31
CSB-PGBD3P0DP91 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CSB-PGBD3P0DP91 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CSB-PGBD3P0DP91 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms