Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC008837.2-201ENST00000513076 418 ntBASIC4.25□□□□□ -1.73
RB1P06400 MTCO1P30-201ENST00000515244 580 ntBASIC4.25□□□□□ -1.73
RB1P06400 RNU6-1261P-201ENST00000517194 104 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 IGKV2D-19-201ENST00000523346 262 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.25□□□□□ -1.73
RB1P06400 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.25□□□□□ -1.73
RB1P06400 ZNF705CP-201ENST00000530515 889 ntBASIC4.25□□□□□ -1.73
RB1P06400 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 OR8L1P-201ENST00000534005 955 ntBASIC4.25□□□□□ -1.73
RB1P06400 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.25□□□□□ -1.73
RB1P06400 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 AC092470.1-201ENST00000546187 132 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC007424.1-203ENST00000554613 687 ntBASIC4.25□□□□□ -1.73
RB1P06400 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.25□□□□□ -1.73
RB1P06400 TRAV15-201ENST00000556680 249 ntBASIC4.25□□□□□ -1.73
RB1P06400 MTND4P33-201ENST00000556706 766 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC090695.1-201ENST00000561269 1222 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC087499.8-201ENST00000578406 226 ntBASIC4.25□□□□□ -1.73
RB1P06400 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.25□□□□□ -1.73
RB1P06400 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.25□□□□□ -1.73
RB1P06400 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 AC005332.6-201ENST00000613178 446 ntBASIC4.25□□□□□ -1.73
RB1P06400 AC107075.1-201ENST00000613695 314 ntBASIC4.25□□□□□ -1.73
RB1P06400 AL138721.1-201ENST00000616756 179 ntBASIC4.25□□□□□ -1.73
RB1P06400 RMST_9.1-201ENST00000619945 193 ntBASIC4.25□□□□□ -1.73
RB1P06400 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RB1P06400 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.25□□□□□ -1.73
RB1P06400 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RB1P06400 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
RB1P06400 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.25□□□□□ -1.73
RB1P06400 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.24□□□□□ -1.73
RB1P06400 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RB1P06400 NMD3P1-201ENST00000439704 1488 ntBASIC4.24□□□□□ -1.73
RB1P06400 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 MIR448-201ENST00000362131 111 ntBASIC4.24□□□□□ -1.73
RB1P06400 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RB1P06400 MIR3074-201ENST00000384885 81 ntBASIC4.24□□□□□ -1.73
RB1P06400 MIR183-201ENST00000384958 110 ntBASIC4.24□□□□□ -1.73
RB1P06400 ATP5F1P4-201ENST00000397288 746 ntBASIC4.24□□□□□ -1.73
RB1P06400 RNA5SP80-201ENST00000410475 111 ntBASIC4.24□□□□□ -1.73
RB1P06400 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.24□□□□□ -1.73
RB1P06400 AL139247.1-201ENST00000422768 325 ntBASIC4.24□□□□□ -1.73
RB1P06400 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.24□□□□□ -1.73
RB1P06400 FABP3P2-201ENST00000453169 399 ntBASIC4.24□□□□□ -1.73
RB1P06400 RAD23BP3-201ENST00000454157 1152 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.24□□□□□ -1.73
RB1P06400 TRBV26-201ENST00000456572 344 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.24□□□□□ -1.73
RB1P06400 AC010301.1-201ENST00000473936 355 ntBASIC4.24□□□□□ -1.73
RB1P06400 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC013828.1-201ENST00000481845 158 ntBASIC4.24□□□□□ -1.73
RB1P06400 UBE2CP3-201ENST00000502715 450 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.24□□□□□ -1.73
RB1P06400 MTCYBP37-201ENST00000510642 1133 ntBASIC4.24□□□□□ -1.73
RB1P06400 SCARNA13-201ENST00000516672 275 ntBASIC4.24□□□□□ -1.73
RB1P06400 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.24□□□□□ -1.73
RB1P06400 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.24□□□□□ -1.73
RB1P06400 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.24□□□□□ -1.73
RB1P06400 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.24□□□□□ -1.73
RB1P06400 OR4A45P-201ENST00000529954 901 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC005832.3-201ENST00000537929 631 ntBASIC4.24□□□□□ -1.73
RB1P06400 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.24□□□□□ -1.73
RB1P06400 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.24□□□□□ -1.73
RB1P06400 MIR432-201ENST00000606207 94 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.24□□□□□ -1.73
RB1P06400 AC008993.2-201ENST00000631744 806 ntBASIC4.24□□□□□ -1.73
RB1P06400 AC055839.1-201ENST00000634467 498 ntBASIC4.24□□□□□ -1.73
RB1P06400 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 AP002001.2-201ENST00000529025 1469 ntBASIC4.24□□□□□ -1.73
RB1P06400 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RB1P06400 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
RB1P06400 AC107982.1-201ENST00000507171 1300 ntBASIC4.23□□□□□ -1.73
RB1P06400 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RB1P06400 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.23□□□□□ -1.73
RB1P06400 AC032011.1-201ENST00000611703 1549 ntBASIC4.23□□□□□ -1.73
RB1P06400 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RB1P06400 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.23□□□□□ -1.73
RB1P06400 RNU6-657P-201ENST00000383904 107 ntBASIC4.23□□□□□ -1.73
RB1P06400 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.23□□□□□ -1.73
RB1P06400 AL590084.1-201ENST00000407885 387 ntBASIC4.23□□□□□ -1.73
RB1P06400 RNU2-28P-201ENST00000410457 189 ntBASIC4.23□□□□□ -1.73
RB1P06400 RN7SKP167-201ENST00000411047 285 ntBASIC4.23□□□□□ -1.73
RB1P06400 AL133384.1-201ENST00000412744 351 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms