Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL161631.1-201ENST00000417933 486 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC092647.1-201ENST00000420654 287 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 DYNLL1P7-201ENST00000429273 258 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL031663.1-201ENST00000437445 219 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC122718.1-201ENST00000439448 744 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 RPL21P89-201ENST00000444021 467 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL592447.1-201ENST00000447592 540 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 RNA5SP269-201ENST00000459032 137 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 FAM133DP-201ENST00000464802 691 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 RPL23AP71-201ENST00000470966 469 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 TCP11X3P-202ENST00000514289 1254 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC138915.2-201ENST00000569776 97 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 MIR4528-201ENST00000577763 90 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 MIR4286-201ENST00000580651 93 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC090312.2-201ENST00000582687 378 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL138721.1-201ENST00000616756 179 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC138932.5-201ENST00000617759 563 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AC019278.1-201ENST00000623516 479 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 HSPA8P17-201ENST00000427029 1382 ntBASIC4.98□□□□□ -1.61
HLA-DOAP06340 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DOAP06340 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DOAP06340 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC022893.2-201ENST00000564832 3296 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 RLIMP1-201ENST00000339626 1680 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 RLIMP2-201ENST00000427891 1563 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 TEX21P-201ENST00000447107 1476 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 OR11H4-201ENST00000315409 1082 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 FGF7P2-201ENST00000332473 296 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 RN7SKP280-201ENST00000364196 304 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 Y_RNA.303-201ENST00000364998 94 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 Y_RNA.554-201ENST00000384672 102 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC025750.1-201ENST00000399891 379 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 RN7SKP27-201ENST00000410684 333 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 RPS7P13-201ENST00000413955 498 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 RPL23AP39-201ENST00000415533 405 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC048351.1-201ENST00000420064 602 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 SKP1P3-201ENST00000429280 487 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 SSXP1-201ENST00000453640 473 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 RPL23AP12-201ENST00000467573 473 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 MTCYBP43-201ENST00000513621 740 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 LSM3P2-201ENST00000551246 273 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 TPRKBP2-201ENST00000565969 475 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC022655.2-201ENST00000577280 318 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 SLC25A36P1-201ENST00000590111 465 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AL390838.2-201ENST00000602394 274 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC072046.2-201ENST00000618366 268 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AL161637.1-201ENST00000622380 412 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 AC095031.1-201ENST00000623685 672 ntBASIC4.97□□□□□ -1.61
HLA-DOAP06340 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DOAP06340 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DOAP06340 AP001284.1-201ENST00000528393 2118 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms