Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.26□□□□□ -1.89
P04436 RN7SL293P-201ENST00000481765 281 ntBASIC3.26□□□□□ -1.89
P04436 AC093801.2-201ENST00000503966 1050 ntBASIC3.26□□□□□ -1.89
P04436 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.26□□□□□ -1.89
P04436 SNORA70.14-201ENST00000516205 110 ntBASIC3.26□□□□□ -1.89
P04436 IGKV2D-23-201ENST00000518179 286 ntBASIC3.26□□□□□ -1.89
P04436 MTCYBP41-201ENST00000528913 1123 ntBASIC3.26□□□□□ -1.89
P04436 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.26□□□□□ -1.89
P04436 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.26□□□□□ -1.89
P04436 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.26□□□□□ -1.89
P04436 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.26□□□□□ -1.89
P04436 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.26□□□□□ -1.89
P04436 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.26□□□□□ -1.89
P04436 AGGF1P8-201ENST00000562979 1000 ntBASIC3.26□□□□□ -1.89
P04436 AL133457.1-201ENST00000564251 987 ntBASIC3.26□□□□□ -1.89
P04436 AC023825.1-201ENST00000566704 1030 ntBASIC3.26□□□□□ -1.89
P04436 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.26□□□□□ -1.89
P04436 MTCO1P40-201ENST00000574371 625 ntBASIC3.26□□□□□ -1.89
P04436 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.26□□□□□ -1.89
P04436 MIR3690-201ENST00000580266 75 ntBASIC3.26□□□□□ -1.89
P04436 AC005412.1-201ENST00000580812 1049 ntBASIC3.26□□□□□ -1.89
P04436 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.26□□□□□ -1.89
P04436 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.26□□□□□ -1.89
P04436 BNIP3P22-201ENST00000593399 556 ntBASIC3.26□□□□□ -1.89
P04436 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.26□□□□□ -1.89
P04436 AC013468.1-201ENST00000608680 598 ntBASIC3.26□□□□□ -1.89
P04436 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.26□□□□□ -1.89
P04436 AC006249.1-201ENST00000621223 471 ntBASIC3.26□□□□□ -1.89
P04436 AC004777.1-201ENST00000624317 287 ntBASIC3.26□□□□□ -1.89
P04436 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.26□□□□□ -1.89
P04436 AL121594.5-201ENST00000631724 573 ntBASIC3.26□□□□□ -1.89
P04436 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
P04436 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
P04436 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
P04436 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
P04436 OTUD4P1-201ENST00000237841 3067 ntBASIC3.25□□□□□ -1.89
P04436 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.25□□□□□ -1.89
P04436 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
P04436 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
P04436 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
P04436 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
P04436 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
P04436 HMGN2P8-201ENST00000391458 268 ntBASIC3.25□□□□□ -1.89
P04436 AL121972.1-201ENST00000402023 252 ntBASIC3.25□□□□□ -1.89
P04436 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
P04436 CRYBB2P1-203ENST00000415709 538 ntBASIC3.25□□□□□ -1.89
P04436 RPS7P15-201ENST00000415804 584 ntBASIC3.25□□□□□ -1.89
P04436 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 AC006989.1-201ENST00000427212 131 ntBASIC3.25□□□□□ -1.89
P04436 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 AF228730.2-201ENST00000438784 848 ntBASIC3.25□□□□□ -1.89
P04436 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.25□□□□□ -1.89
P04436 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 RPL5P24-201ENST00000463742 885 ntBASIC3.25□□□□□ -1.89
P04436 BTF3L4P4-201ENST00000506381 449 ntBASIC3.25□□□□□ -1.89
P04436 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 RNU2-27P-201ENST00000516185 142 ntBASIC3.25□□□□□ -1.89
P04436 SNORA70.18-201ENST00000516696 98 ntBASIC3.25□□□□□ -1.89
P04436 RNU6-579P-201ENST00000516879 102 ntBASIC3.25□□□□□ -1.89
P04436 RN7SKP116-201ENST00000516902 319 ntBASIC3.25□□□□□ -1.89
P04436 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 HMGB1P1-201ENST00000522557 636 ntBASIC3.25□□□□□ -1.89
P04436 OR4A45P-201ENST00000529954 901 ntBASIC3.25□□□□□ -1.89
P04436 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.25□□□□□ -1.89
P04436 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.25□□□□□ -1.89
P04436 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
P04436 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 MTATP6P2-201ENST00000603319 678 ntBASIC3.25□□□□□ -1.89
P04436 AP002906.1-201ENST00000603405 233 ntBASIC3.25□□□□□ -1.89
P04436 AC090425.2-201ENST00000608818 501 ntBASIC3.25□□□□□ -1.89
P04436 AC005156.1-201ENST00000613371 573 ntBASIC3.25□□□□□ -1.89
P04436 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 U4.6-201ENST00000621618 127 ntBASIC3.25□□□□□ -1.89
P04436 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.25□□□□□ -1.89
P04436 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
P04436 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
P04436 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.25□□□□□ -1.89
P04436 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
P04436 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
P04436 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
P04436 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.24□□□□□ -1.89
P04436 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
P04436 AF127577.6-201ENST00000623352 2191 ntBASIC3.24□□□□□ -1.89
P04436 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
P04436 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
P04436 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
P04436 SNORA63.1-201ENST00000362493 131 ntBASIC3.24□□□□□ -1.89
P04436 RNA5SP72-201ENST00000364442 117 ntBASIC3.24□□□□□ -1.89
P04436 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.24□□□□□ -1.89
P04436 U6.112-201ENST00000384129 70 ntBASIC3.24□□□□□ -1.89
P04436 MIR16-1-201ENST00000385271 89 ntBASIC3.24□□□□□ -1.89
P04436 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
P04436 RNA5SP56-201ENST00000410277 118 ntBASIC3.24□□□□□ -1.89
P04436 AC093578.1-201ENST00000415219 368 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms