Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RNA5SP391-201ENST00000363456 119 ntBASIC3.9□□□□□ -1.79
VTNP04004 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
VTNP04004 SNORD17-201ENST00000390930 237 ntBASIC3.9□□□□□ -1.79
VTNP04004 RNU6-1242P-201ENST00000391052 103 ntBASIC3.9□□□□□ -1.79
VTNP04004 GSTA8P-201ENST00000404253 637 ntBASIC3.9□□□□□ -1.79
VTNP04004 AL136310.1-201ENST00000404926 654 ntBASIC3.9□□□□□ -1.79
VTNP04004 HIGD1AP15-201ENST00000416198 280 ntBASIC3.9□□□□□ -1.79
VTNP04004 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.9□□□□□ -1.79
VTNP04004 AL009174.1-201ENST00000426577 416 ntBASIC3.9□□□□□ -1.79
VTNP04004 MTATP6P17-201ENST00000431030 672 ntBASIC3.9□□□□□ -1.79
VTNP04004 AC105402.2-201ENST00000438503 358 ntBASIC3.9□□□□□ -1.79
VTNP04004 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.9□□□□□ -1.79
VTNP04004 AC004865.1-201ENST00000442276 1003 ntBASIC3.9□□□□□ -1.79
VTNP04004 AC112492.1-201ENST00000449607 712 ntBASIC3.9□□□□□ -1.79
VTNP04004 DNAJC19P1-201ENST00000455312 319 ntBASIC3.9□□□□□ -1.79
VTNP04004 RPS26P15-201ENST00000488067 348 ntBASIC3.9□□□□□ -1.79
VTNP04004 AC084024.2-201ENST00000503480 791 ntBASIC3.9□□□□□ -1.79
VTNP04004 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.9□□□□□ -1.79
VTNP04004 AC026784.1-201ENST00000507986 352 ntBASIC3.9□□□□□ -1.79
VTNP04004 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.9□□□□□ -1.79
VTNP04004 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.9□□□□□ -1.79
VTNP04004 RN7SKP287-201ENST00000516546 266 ntBASIC3.9□□□□□ -1.79
VTNP04004 Y_RNA.717-201ENST00000517106 92 ntBASIC3.9□□□□□ -1.79
VTNP04004 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.9□□□□□ -1.79
VTNP04004 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.9□□□□□ -1.79
VTNP04004 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.9□□□□□ -1.79
VTNP04004 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.9□□□□□ -1.79
VTNP04004 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.9□□□□□ -1.79
VTNP04004 AC015688.2-201ENST00000584523 262 ntBASIC3.9□□□□□ -1.79
VTNP04004 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.9□□□□□ -1.79
VTNP04004 AC093424.1-201ENST00000604999 338 ntBASIC3.9□□□□□ -1.79
VTNP04004 AL158163.2-201ENST00000619110 700 ntBASIC3.9□□□□□ -1.79
VTNP04004 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.9□□□□□ -1.79
VTNP04004 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.9□□□□□ -1.79
VTNP04004 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.9□□□□□ -1.79
VTNP04004 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.9□□□□□ -1.79
VTNP04004 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VTNP04004 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VTNP04004 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VTNP04004 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VTNP04004 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VTNP04004 OTUD4P1-201ENST00000237841 3067 ntBASIC3.9□□□□□ -1.79
VTNP04004 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
VTNP04004 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
VTNP04004 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 AL049781.1-201ENST00000623195 3585 ntBASIC3.89□□□□□ -1.79
VTNP04004 OR52B1P-201ENST00000316506 909 ntBASIC3.89□□□□□ -1.79
VTNP04004 RNU4-51P-201ENST00000364206 140 ntBASIC3.89□□□□□ -1.79
VTNP04004 RNU1-33P-201ENST00000364249 162 ntBASIC3.89□□□□□ -1.79
VTNP04004 RNA5SP267-201ENST00000364893 126 ntBASIC3.89□□□□□ -1.79
VTNP04004 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 SNORA9-201ENST00000384215 133 ntBASIC3.89□□□□□ -1.79
VTNP04004 RNU6-636P-201ENST00000384598 107 ntBASIC3.89□□□□□ -1.79
VTNP04004 SFR1P1-201ENST00000403720 688 ntBASIC3.89□□□□□ -1.79
VTNP04004 RNU6-575P-201ENST00000411326 105 ntBASIC3.89□□□□□ -1.79
VTNP04004 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.89□□□□□ -1.79
VTNP04004 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.89□□□□□ -1.79
VTNP04004 HSFY4P-201ENST00000415994 1181 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC017079.2-201ENST00000416102 485 ntBASIC3.89□□□□□ -1.79
VTNP04004 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.89□□□□□ -1.79
VTNP04004 NANOGP2-201ENST00000435391 727 ntBASIC3.89□□□□□ -1.79
VTNP04004 RPS3AP12-201ENST00000443616 753 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.89□□□□□ -1.79
VTNP04004 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.89□□□□□ -1.79
VTNP04004 AL121877.1-201ENST00000453704 622 ntBASIC3.89□□□□□ -1.79
VTNP04004 SNORD11.1-201ENST00000459482 85 ntBASIC3.89□□□□□ -1.79
VTNP04004 AP000563.1-201ENST00000490865 758 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.89□□□□□ -1.79
VTNP04004 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.89□□□□□ -1.79
VTNP04004 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 MTATP6P22-201ENST00000507369 598 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC118282.2-201ENST00000508739 374 ntBASIC3.89□□□□□ -1.79
VTNP04004 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 RN7SKP82-201ENST00000516786 223 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.89□□□□□ -1.79
VTNP04004 AL161713.1-201ENST00000555538 145 ntBASIC3.89□□□□□ -1.79
VTNP04004 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.89□□□□□ -1.79
VTNP04004 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.89□□□□□ -1.79
VTNP04004 AC023813.2-201ENST00000564321 469 ntBASIC3.89□□□□□ -1.79
VTNP04004 BPTFP1-201ENST00000579209 492 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.89□□□□□ -1.79
VTNP04004 AC022022.2-201ENST00000602989 360 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 AC113368.1-201ENST00000603736 382 ntBASIC3.89□□□□□ -1.79
VTNP04004 MTND3P19-201ENST00000603825 345 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC115621.1-201ENST00000604653 858 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC079395.3-201ENST00000615161 484 ntBASIC3.89□□□□□ -1.79
VTNP04004 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 AC109809.1-201ENST00000619665 545 ntBASIC3.89□□□□□ -1.79
VTNP04004 AP003355.3-201ENST00000623465 114 ntBASIC3.89□□□□□ -1.79
VTNP04004 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VTNP04004 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
VTNP04004 SEPT7P7-201ENST00000420492 1301 ntBASIC3.89□□□□□ -1.79
VTNP04004 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms