Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.29□□□□□ -1.88
APOEP02649 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
APOEP02649 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.29□□□□□ -1.88
APOEP02649 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
APOEP02649 AC107081.3-201ENST00000612715 2034 ntBASIC3.29□□□□□ -1.88
APOEP02649 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.29□□□□□ -1.88
APOEP02649 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOEP02649 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.28□□□□□ -1.88
APOEP02649 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
APOEP02649 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.28□□□□□ -1.88
APOEP02649 OR5BR1P-201ENST00000524992 1330 ntBASIC3.28□□□□□ -1.88
APOEP02649 ZNF33CP-201ENST00000432492 2030 ntBASIC3.28□□□□□ -1.88
APOEP02649 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
APOEP02649 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
APOEP02649 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.28□□□□□ -1.88
APOEP02649 SNORA70E-201ENST00000384492 135 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC007899.1-201ENST00000412776 775 ntBASIC3.28□□□□□ -1.88
APOEP02649 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.28□□□□□ -1.88
APOEP02649 AJ239321.1-201ENST00000424255 564 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC008065.1-201ENST00000428525 348 ntBASIC3.28□□□□□ -1.88
APOEP02649 RPS24P8-201ENST00000431490 402 ntBASIC3.28□□□□□ -1.88
APOEP02649 HMGN2P20-201ENST00000437531 273 ntBASIC3.28□□□□□ -1.88
APOEP02649 MTCYBP12-201ENST00000440559 1134 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC069540.1-201ENST00000446320 988 ntBASIC3.28□□□□□ -1.88
APOEP02649 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
APOEP02649 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.28□□□□□ -1.88
APOEP02649 ST13P14-201ENST00000474095 734 ntBASIC3.28□□□□□ -1.88
APOEP02649 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
APOEP02649 RPS3AP43-201ENST00000479743 781 ntBASIC3.28□□□□□ -1.88
APOEP02649 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.28□□□□□ -1.88
APOEP02649 RN7SKP57-201ENST00000517248 293 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.28□□□□□ -1.88
APOEP02649 AC034268.2-201ENST00000571784 482 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.28□□□□□ -1.88
APOEP02649 AC012493.2-201ENST00000595083 291 ntBASIC3.28□□□□□ -1.88
APOEP02649 HMGB1P51-201ENST00000605166 638 ntBASIC3.28□□□□□ -1.88
APOEP02649 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.28□□□□□ -1.88
APOEP02649 AL591516.1-201ENST00000611326 274 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
APOEP02649 AC018692.3-201ENST00000623929 123 ntBASIC3.28□□□□□ -1.88
APOEP02649 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.28□□□□□ -1.88
APOEP02649 MTND5P24-201ENST00000438892 1767 ntBASIC3.28□□□□□ -1.89
APOEP02649 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
APOEP02649 GTF2H2B-203ENST00000508065 1432 ntBASIC3.27□□□□□ -1.89
APOEP02649 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.27□□□□□ -1.89
APOEP02649 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.27□□□□□ -1.89
APOEP02649 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
APOEP02649 RNU6-386P-201ENST00000362650 107 ntBASIC3.27□□□□□ -1.89
APOEP02649 U3.6-201ENST00000363622 211 ntBASIC3.27□□□□□ -1.89
APOEP02649 RNU6-761P-201ENST00000384148 107 ntBASIC3.27□□□□□ -1.89
APOEP02649 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
APOEP02649 MIR491-201ENST00000384877 84 ntBASIC3.27□□□□□ -1.89
APOEP02649 RPL5P18-201ENST00000406671 891 ntBASIC3.27□□□□□ -1.89
APOEP02649 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.27□□□□□ -1.89
APOEP02649 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.27□□□□□ -1.89
APOEP02649 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.27□□□□□ -1.89
APOEP02649 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.27□□□□□ -1.89
APOEP02649 RPL21P8-201ENST00000465083 535 ntBASIC3.27□□□□□ -1.89
APOEP02649 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.27□□□□□ -1.89
APOEP02649 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.27□□□□□ -1.89
APOEP02649 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.27□□□□□ -1.89
APOEP02649 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.27□□□□□ -1.89
APOEP02649 MIR4474-201ENST00000579189 78 ntBASIC3.27□□□□□ -1.89
APOEP02649 AL161756.2-201ENST00000604597 246 ntBASIC3.27□□□□□ -1.89
APOEP02649 AC026422.1-201ENST00000623961 452 ntBASIC3.27□□□□□ -1.89
APOEP02649 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOEP02649 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
APOEP02649 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
APOEP02649 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.27□□□□□ -1.89
APOEP02649 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.26□□□□□ -1.89
APOEP02649 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
APOEP02649 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.26□□□□□ -1.89
APOEP02649 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOEP02649 GSTA8P-201ENST00000404253 637 ntBASIC3.26□□□□□ -1.89
APOEP02649 AL031121.1-201ENST00000406553 254 ntBASIC3.26□□□□□ -1.89
APOEP02649 RPL23AP47-201ENST00000408017 460 ntBASIC3.26□□□□□ -1.89
APOEP02649 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.26□□□□□ -1.89
APOEP02649 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.26□□□□□ -1.89
APOEP02649 RPL23AP83-201ENST00000434984 473 ntBASIC3.26□□□□□ -1.89
APOEP02649 AC108734.1-201ENST00000439549 399 ntBASIC3.26□□□□□ -1.89
APOEP02649 MED6P1-201ENST00000439659 713 ntBASIC3.26□□□□□ -1.89
APOEP02649 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.26□□□□□ -1.89
APOEP02649 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.26□□□□□ -1.89
APOEP02649 AC093278.1-201ENST00000494700 600 ntBASIC3.26□□□□□ -1.89
APOEP02649 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.26□□□□□ -1.89
APOEP02649 RNU4-60P-201ENST00000517239 135 ntBASIC3.26□□□□□ -1.89
APOEP02649 AC010928.3-201ENST00000587712 541 ntBASIC3.26□□□□□ -1.89
APOEP02649 PRELID3BP8-201ENST00000604148 295 ntBASIC3.26□□□□□ -1.89
APOEP02649 AC138473.1-201ENST00000605717 526 ntBASIC3.26□□□□□ -1.89
APOEP02649 AC112503.1-201ENST00000608436 391 ntBASIC3.26□□□□□ -1.89
APOEP02649 MIR8057-201ENST00000620957 69 ntBASIC3.26□□□□□ -1.89
APOEP02649 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
APOEP02649 AF117829.1-206ENST00000621883 3802 ntBASIC3.26□□□□□ -1.89
APOEP02649 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
APOEP02649 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
APOEP02649 AC008264.2-201ENST00000610193 3731 ntBASIC3.25□□□□□ -1.89
APOEP02649 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.25□□□□□ -1.89
APOEP02649 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.25□□□□□ -1.89
APOEP02649 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
APOEP02649 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms