Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU6-670P-201ENST00000364312 104 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 MIR513B-201ENST00000385136 84 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 MTND1P20-201ENST00000430341 950 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 HMGB3P9-201ENST00000441799 583 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 XKRY2-201ENST00000442362 1093 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC008264.1-201ENST00000447612 367 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 RPL23AP67-201ENST00000465341 474 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 PRDX3P4-201ENST00000470828 747 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 AF213884.2-201ENST00000510417 903 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.92□□□□□ -1.78
COL2A1P02458 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC090819.1-201ENST00000523800 1111 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
COL2A1P02458 AC087276.1-201ENST00000529659 480 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.92□□□□□ -1.78
COL2A1P02458 AC006539.2-201ENST00000601729 572 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AC084373.1-201ENST00000603311 235 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AC084036.1-201ENST00000609190 508 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AL157817.1-201ENST00000614264 790 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AL356321.1-201ENST00000621360 228 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AC006927.2-201ENST00000639256 389 ntBASIC3.92□□□□□ -1.78
COL2A1P02458 AC012078.1-201ENST00000405035 1646 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL2A1P02458 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.91□□□□□ -1.78
COL2A1P02458 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.91□□□□□ -1.78
COL2A1P02458 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.91□□□□□ -1.78
COL2A1P02458 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
COL2A1P02458 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
COL2A1P02458 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.91□□□□□ -1.78
COL2A1P02458 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.91□□□□□ -1.78
COL2A1P02458 AL391417.1-201ENST00000404100 426 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AL136131.1-201ENST00000406079 803 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 Y_RNA.599-201ENST00000410489 109 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 MTCO1P21-201ENST00000416634 589 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 OOSP1P1-201ENST00000423265 274 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.91□□□□□ -1.78
COL2A1P02458 AC002075.2-201ENST00000425207 252 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 MTCYBP39-201ENST00000437562 491 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AC006028.1-201ENST00000438379 402 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AC025750.2-201ENST00000442609 450 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AL096829.2-201ENST00000446582 742 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 ELOCP30-201ENST00000447108 299 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AC099560.2-201ENST00000457554 255 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 SNORD11.1-201ENST00000459482 85 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 NAP1L1P3-201ENST00000462291 880 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 RPL32P14-201ENST00000463196 378 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 OR9N1P-201ENST00000491296 333 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 PRELID3BP7-201ENST00000503606 469 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.91□□□□□ -1.78
COL2A1P02458 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.91□□□□□ -1.78
COL2A1P02458 AC117532.1-201ENST00000514638 323 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 SNORA76.2-201ENST00000517095 137 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 RNU6-889P-201ENST00000517189 103 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AC027309.2-201ENST00000520566 192 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 AC018442.3-201ENST00000523025 183 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 OR10V3P-201ENST00000525712 725 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.91□□□□□ -1.78
COL2A1P02458 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 RNVU1-4-201ENST00000612985 164 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 AP003499.2-201ENST00000624100 483 ntBASIC3.91□□□□□ -1.78
COL2A1P02458 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.91□□□□□ -1.78
COL2A1P02458 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.91□□□□□ -1.78
COL2A1P02458 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
COL2A1P02458 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
COL2A1P02458 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
COL2A1P02458 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.9□□□□□ -1.79
COL2A1P02458 RNU6-906P-201ENST00000384700 70 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 ZNF603P-201ENST00000405613 487 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AL449283.1-202ENST00000418249 604 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.9□□□□□ -1.79
COL2A1P02458 DLGAP5P1-201ENST00000430307 464 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 MTCYBP12-201ENST00000440559 1134 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 OR10R1P-201ENST00000441524 1141 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 MTCO1P53-201ENST00000441633 699 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC007000.2-201ENST00000442564 487 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
COL2A1P02458 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.9□□□□□ -1.79
COL2A1P02458 AC021205.2-201ENST00000480069 347 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 OR2A20P-203ENST00000498397 1268 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.9□□□□□ -1.79
COL2A1P02458 AC010625.1-201ENST00000511296 403 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.9□□□□□ -1.79
COL2A1P02458 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.9□□□□□ -1.79
COL2A1P02458 SNORA70.19-201ENST00000516717 90 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AP000859.1-201ENST00000525536 307 ntBASIC3.9□□□□□ -1.79
COL2A1P02458 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.9□□□□□ -1.79
COL2A1P02458 AC018638.7-201ENST00000605836 1114 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms