Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC012531.5-201ENST00000611375 151 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 MIR7112-201ENST00000616126 65 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.82□□□□□ -1.8
PDGFBP01127 AC068722.2-201ENST00000618734 544 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.82□□□□□ -1.8
PDGFBP01127 AC004808.1-201ENST00000627671 721 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 AC116096.1-201ENST00000566804 2314 ntBASIC3.82□□□□□ -1.8
PDGFBP01127 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PDGFBP01127 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
PDGFBP01127 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AL079305.1-201ENST00000623159 3008 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFBP01127 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFBP01127 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PDGFBP01127 NACA3P-201ENST00000359690 648 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFBP01127 RNU6-1226P-201ENST00000384317 107 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 RNU6-549P-201ENST00000384433 107 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 RNU6-441P-201ENST00000384545 106 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFBP01127 LIPT1P1-201ENST00000415870 1186 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFBP01127 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 B3GNT2P1-201ENST00000434960 952 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 OR51B8P-201ENST00000449892 769 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 Z99714.1-201ENST00000450463 807 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 RAD23BP3-201ENST00000454157 1152 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 BTF3P5-201ENST00000457252 467 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 SNORD105B-201ENST00000458770 79 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 SYPL1P1-201ENST00000473622 768 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFBP01127 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFBP01127 NDUFB4P9-201ENST00000511646 388 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC119751.1-201ENST00000513357 765 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 IGLVIV-53-201ENST00000520107 367 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFBP01127 AP001207.1-201ENST00000524051 481 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFBP01127 OR4A45P-201ENST00000529954 901 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC103843.2-201ENST00000530523 682 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.81□□□□□ -1.8
PDGFBP01127 CYCSP28-201ENST00000534284 321 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFBP01127 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFBP01127 MIR5186-201ENST00000577504 120 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.81□□□□□ -1.8
PDGFBP01127 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFBP01127 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.81□□□□□ -1.8
PDGFBP01127 AL355812.1-201ENST00000603215 216 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC006077.1-201ENST00000604746 343 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.81□□□□□ -1.8
PDGFBP01127 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC010872.1-201ENST00000624225 675 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC010608.3-201ENST00000625048 527 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 AC013437.2-201ENST00000639587 677 ntBASIC3.81□□□□□ -1.8
PDGFBP01127 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDGFBP01127 AL359893.1-201ENST00000447628 1580 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PDGFBP01127 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFBP01127 EXOC5P1-201ENST00000510543 1969 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 BDP1P-201ENST00000582658 1990 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 AC011266.1-201ENST00000624119 3569 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.8□□□□□ -1.8
PDGFBP01127 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PDGFBP01127 MT-TC-201ENST00000387405 66 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.8□□□□□ -1.8
PDGFBP01127 MTCO2P31-201ENST00000402702 684 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AL121978.1-201ENST00000402778 359 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC092638.1-201ENST00000411966 1275 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PDGFBP01127 HSFY4P-201ENST00000415994 1181 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 RAC1P3-201ENST00000416129 580 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 UBTFL3-201ENST00000418934 1024 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 OFD1P18Y-201ENST00000420889 959 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AL592437.1-201ENST00000443781 492 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 SETD6P1-201ENST00000444575 317 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AL671855.1-201ENST00000446875 1203 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.8□□□□□ -1.8
PDGFBP01127 MTATP6P14-201ENST00000455189 673 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 NAP1L1P3-201ENST00000462291 880 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 RPL23AP65-201ENST00000475608 468 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 UBTFL6-201ENST00000477929 1024 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC104982.1-201ENST00000478775 574 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 AC004069.2-201ENST00000505438 1114 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC069306.1-201ENST00000507006 843 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AP003385.6-201ENST00000531603 374 ntBASIC3.8□□□□□ -1.8
PDGFBP01127 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.8□□□□□ -1.8
PDGFBP01127 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.8□□□□□ -1.8
PDGFBP01127 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms