Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX3O60493 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SNX3O60493 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
SNX3O60493 RNU6-374P-201ENST00000364146 108 ntBASIC3.71□□□□□ -1.82
SNX3O60493 U3.15-201ENST00000365398 212 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX3O60493 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 AL356276.2-201ENST00000435919 558 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC073143.1-201ENST00000436316 395 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX3O60493 VN1R10P-201ENST00000447106 875 ntBASIC3.71□□□□□ -1.82
SNX3O60493 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 TPT1P13-201ENST00000449760 499 ntBASIC3.71□□□□□ -1.82
SNX3O60493 SLC31A1P1-201ENST00000451221 567 ntBASIC3.71□□□□□ -1.82
SNX3O60493 SNORD108-201ENST00000459332 71 ntBASIC3.71□□□□□ -1.82
SNX3O60493 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.71□□□□□ -1.82
SNX3O60493 AC146507.1-201ENST00000468335 354 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC022034.3-201ENST00000471393 478 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC087312.1-201ENST00000471411 480 ntBASIC3.71□□□□□ -1.82
SNX3O60493 SETP14-201ENST00000497538 873 ntBASIC3.71□□□□□ -1.82
SNX3O60493 WBP1LP4-201ENST00000505043 344 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.71□□□□□ -1.82
SNX3O60493 AC020593.1-201ENST00000507399 299 ntBASIC3.71□□□□□ -1.82
SNX3O60493 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SNX3O60493 RN7SKP287-201ENST00000516546 266 ntBASIC3.71□□□□□ -1.82
SNX3O60493 RNU4-60P-201ENST00000517239 135 ntBASIC3.71□□□□□ -1.82
SNX3O60493 MRPS36P3-201ENST00000519284 130 ntBASIC3.71□□□□□ -1.82
SNX3O60493 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SNX3O60493 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SNX3O60493 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.71□□□□□ -1.82
SNX3O60493 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 AC009097.3-201ENST00000563557 1018 ntBASIC3.71□□□□□ -1.82
SNX3O60493 LARP7P2-201ENST00000575306 125 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.71□□□□□ -1.82
SNX3O60493 AC093424.1-201ENST00000604999 338 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC091167.4-201ENST00000605079 184 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AL513477.2-201ENST00000607858 568 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC211433.2-201ENST00000608433 387 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AL354976.1-201ENST00000613843 387 ntBASIC3.71□□□□□ -1.82
SNX3O60493 MIR6719-201ENST00000622428 87 ntBASIC3.71□□□□□ -1.82
SNX3O60493 MIR7153-201ENST00000637758 57 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AC106871.1-201ENST00000568324 3102 ntBASIC3.71□□□□□ -1.82
SNX3O60493 AP002001.2-201ENST00000529025 1469 ntBASIC3.71□□□□□ -1.82
SNX3O60493 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SNX3O60493 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX3O60493 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SNX3O60493 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX3O60493 SNRPEP3-201ENST00000338402 276 ntBASIC3.7□□□□□ -1.82
SNX3O60493 RNA5SP42-201ENST00000364278 115 ntBASIC3.7□□□□□ -1.82
SNX3O60493 RNU11-4P-201ENST00000391149 133 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AC016769.3-201ENST00000396562 315 ntBASIC3.7□□□□□ -1.82
SNX3O60493 ARF4P3-201ENST00000397387 509 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AL355379.1-201ENST00000405542 640 ntBASIC3.7□□□□□ -1.82
SNX3O60493 TPT1P2-201ENST00000413105 503 ntBASIC3.7□□□□□ -1.82
SNX3O60493 RPS7P13-201ENST00000413955 498 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AL008987.1-201ENST00000415528 237 ntBASIC3.7□□□□□ -1.82
SNX3O60493 RPS24P7-201ENST00000416921 246 ntBASIC3.7□□□□□ -1.82
SNX3O60493 RPS15AP6-201ENST00000420703 385 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX3O60493 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.7□□□□□ -1.82
SNX3O60493 BX679664.1-201ENST00000434429 253 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX3O60493 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AL591719.1-201ENST00000444669 744 ntBASIC3.7□□□□□ -1.82
SNX3O60493 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX3O60493 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX3O60493 HMGB1P28-201ENST00000507778 552 ntBASIC3.7□□□□□ -1.82
SNX3O60493 MTCO3P44-201ENST00000510977 541 ntBASIC3.7□□□□□ -1.82
SNX3O60493 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AC112673.1-201ENST00000513168 575 ntBASIC3.7□□□□□ -1.82
SNX3O60493 RNA5SP179-201ENST00000517284 121 ntBASIC3.7□□□□□ -1.82
SNX3O60493 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.7□□□□□ -1.82
SNX3O60493 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX3O60493 SLC2A13P1-201ENST00000531560 322 ntBASIC3.7□□□□□ -1.82
SNX3O60493 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.7□□□□□ -1.82
SNX3O60493 AC008127.2-201ENST00000549925 1075 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AC010198.2-201ENST00000550612 259 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AC068831.4-201ENST00000556118 109 ntBASIC3.7□□□□□ -1.82
SNX3O60493 MIR3186-201ENST00000577404 85 ntBASIC3.7□□□□□ -1.82
SNX3O60493 OR4K7P-201ENST00000580232 945 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.7□□□□□ -1.82
SNX3O60493 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX3O60493 AC025588.2-201ENST00000604851 466 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.7□□□□□ -1.82
SNX3O60493 AC097478.2-201ENST00000610572 514 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AC090116.1-201ENST00000615679 446 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AC092650.2-201ENST00000619984 902 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AP002782.1-201ENST00000623107 614 ntBASIC3.7□□□□□ -1.82
SNX3O60493 AP000770.2-201ENST00000623694 100 ntBASIC3.7□□□□□ -1.82
SNX3O60493 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX3O60493 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.7□□□□□ -1.82
SNX3O60493 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms