Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX4O60224 CETN4P-201ENST00000432407 469 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX4O60224 RPL7P34-201ENST00000433316 712 ntBASIC3.83□□□□□ -1.8
SSX4O60224 RPS3AP54-201ENST00000435535 734 ntBASIC3.83□□□□□ -1.8
SSX4O60224 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 PPIAP3-201ENST00000450588 505 ntBASIC3.83□□□□□ -1.8
SSX4O60224 DDX39BP2-208ENST00000453923 258 ntBASIC3.83□□□□□ -1.8
SSX4O60224 RN7SL585P-201ENST00000470538 280 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC007537.2-201ENST00000472093 511 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX4O60224 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 AC017037.1-201ENST00000508460 471 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX4O60224 AC104986.1-201ENST00000517978 436 ntBASIC3.83□□□□□ -1.8
SSX4O60224 MRPL49P2-201ENST00000521066 465 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 PHBP17-201ENST00000528576 541 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 RFPL1S-203ENST00000539579 330 ntBASIC3.83□□□□□ -1.8
SSX4O60224 PSMB7P1-201ENST00000556349 514 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC074050.1-201ENST00000563247 211 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX4O60224 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 MIR3160-1-201ENST00000577972 85 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
SSX4O60224 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
SSX4O60224 BNIP3P24-201ENST00000593398 557 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC091304.6-201ENST00000619761 202 ntBASIC3.83□□□□□ -1.8
SSX4O60224 AC008785.1-201ENST00000624475 456 ntBASIC3.83□□□□□ -1.8
SSX4O60224 ZNF542P-204ENST00000482727 1305 ntBASIC3.83□□□□□ -1.8
SSX4O60224 DCAF13P1-201ENST00000495256 1330 ntBASIC3.83□□□□□ -1.8
SSX4O60224 MTND4P34-201ENST00000572715 1371 ntBASIC3.83□□□□□ -1.8
SSX4O60224 MTCO1P14-201ENST00000441695 1559 ntBASIC3.83□□□□□ -1.8
SSX4O60224 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
SSX4O60224 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX4O60224 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.83□□□□□ -1.8
SSX4O60224 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.83□□□□□ -1.8
SSX4O60224 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSX4O60224 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
SSX4O60224 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 MARK2P15-201ENST00000432204 2186 ntBASIC3.82□□□□□ -1.8
SSX4O60224 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 HSPA8P1-201ENST00000425843 1833 ntBASIC3.82□□□□□ -1.8
SSX4O60224 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 MTCO1P23-201ENST00000415223 1526 ntBASIC3.82□□□□□ -1.8
SSX4O60224 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 GDI2P1-201ENST00000429312 1336 ntBASIC3.82□□□□□ -1.8
SSX4O60224 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 XIAPP3-201ENST00000312918 795 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AL121657.1-201ENST00000327215 531 ntBASIC3.82□□□□□ -1.8
SSX4O60224 RNA5SP307-201ENST00000362863 116 ntBASIC3.82□□□□□ -1.8
SSX4O60224 U3.15-201ENST00000365398 212 ntBASIC3.82□□□□□ -1.8
SSX4O60224 MT-TC-201ENST00000387405 66 ntBASIC3.82□□□□□ -1.8
SSX4O60224 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
SSX4O60224 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 MIR1250-201ENST00000408098 113 ntBASIC3.82□□□□□ -1.8
SSX4O60224 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX4O60224 AC127537.2-201ENST00000439258 465 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC239367.2-201ENST00000447309 705 ntBASIC3.82□□□□□ -1.8
SSX4O60224 RSL24D1P3-201ENST00000449255 495 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 ISCUP1-201ENST00000454451 448 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AL109741.2-201ENST00000455561 343 ntBASIC3.82□□□□□ -1.8
SSX4O60224 RPL7P22-201ENST00000466005 733 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC105137.1-201ENST00000484355 562 ntBASIC3.82□□□□□ -1.8
SSX4O60224 NCOR1P1-202ENST00000486162 291 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC092045.1-201ENST00000495716 1231 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC146944.2-203ENST00000502493 354 ntBASIC3.82□□□□□ -1.8
SSX4O60224 OR5H5P-201ENST00000503164 928 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AL592156.1-201ENST00000508758 304 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC093824.1-201ENST00000508796 343 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC109458.1-201ENST00000508858 316 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC093281.2-201ENST00000510153 597 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC139495.1-202ENST00000513164 354 ntBASIC3.82□□□□□ -1.8
SSX4O60224 RNA5SP143-201ENST00000516936 115 ntBASIC3.82□□□□□ -1.8
SSX4O60224 MIR2116-201ENST00000517221 80 ntBASIC3.82□□□□□ -1.8
SSX4O60224 RNU4-60P-201ENST00000517239 135 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.82□□□□□ -1.8
SSX4O60224 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 AC084824.1-201ENST00000550917 1005 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms