Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 PCBP2P3-201ENST00000509726 843 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN3O15551 PRELID3BP4-201ENST00000515476 571 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 IGKV2D-36-201ENST00000518643 226 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN3O15551 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN3O15551 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.77□□□□□ -1.81
CLDN3O15551 AP003168.1-201ENST00000530091 307 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN3O15551 AC092470.1-201ENST00000546187 132 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN3O15551 NIFKP8-201ENST00000560500 874 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN3O15551 BPTFP1-201ENST00000579209 492 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.77□□□□□ -1.81
CLDN3O15551 AC006557.5-201ENST00000603126 811 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AC024220.1-201ENST00000603675 484 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 IGHV3-29-201ENST00000604817 344 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 RNVU1-4-201ENST00000612985 164 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AC084757.4-201ENST00000616350 526 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 AL590396.4-201ENST00000636779 956 ntBASIC3.77□□□□□ -1.81
CLDN3O15551 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
CLDN3O15551 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CLDN3O15551 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.77□□□□□ -1.81
CLDN3O15551 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CLDN3O15551 ZNF37BP-203ENST00000452306 1352 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN3O15551 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN3O15551 AC000367.1-201ENST00000452711 1766 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLDN3O15551 AL592494.2-201ENST00000425455 1548 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN3O15551 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
CLDN3O15551 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN3O15551 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN3O15551 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN3O15551 RSL24D1P1-201ENST00000404972 493 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 EI24P1-201ENST00000416584 867 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 RPS3AP9-201ENST00000417027 792 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN3O15551 AC096632.1-201ENST00000427395 310 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 MTATP6P11-201ENST00000428071 670 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC114973.1-201ENST00000429057 632 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AL357552.1-201ENST00000445254 415 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 MRPS31P2-201ENST00000451581 518 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN3O15551 AC034236.1-201ENST00000469891 373 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN3O15551 FCF1P8-201ENST00000510322 597 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC121161.1-201ENST00000510606 652 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN3O15551 IGKV2-26-201ENST00000518305 343 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 IGKV2-23-201ENST00000518729 323 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN3O15551 CR383656.14-201ENST00000551951 406 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN3O15551 AC107954.1-201ENST00000565906 727 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN3O15551 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN3O15551 RN7SL339P-201ENST00000580597 296 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN3O15551 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.76□□□□□ -1.81
CLDN3O15551 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.76□□□□□ -1.81
CLDN3O15551 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC069200.1-201ENST00000609511 323 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AC022149.2-201ENST00000621061 203 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AL356094.1-201ENST00000624663 1212 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.76□□□□□ -1.81
CLDN3O15551 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 AL049781.1-201ENST00000623195 3585 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CLDN3O15551 AL359893.1-201ENST00000447628 1580 ntBASIC3.76□□□□□ -1.81
CLDN3O15551 PRO1804-201ENST00000623780 2050 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.75□□□□□ -1.81
CLDN3O15551 AC032011.1-201ENST00000611703 1549 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN3O15551 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.75□□□□□ -1.81
CLDN3O15551 RNU6-600P-201ENST00000362524 99 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 RNU6-335P-201ENST00000364563 113 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN3O15551 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN3O15551 RNU6-441P-201ENST00000384545 106 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 MT-TC-201ENST00000387405 66 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 PTMAP5-201ENST00000393073 333 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AL121972.1-201ENST00000402023 252 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AL513174.1-201ENST00000423182 629 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.75□□□□□ -1.81
CLDN3O15551 RPP40P1-201ENST00000426762 456 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CLDN3O15551 DEFB130D-201ENST00000426866 237 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN3O15551 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.75□□□□□ -1.81
CLDN3O15551 PRSS3P4-201ENST00000453323 162 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 HMGN3P1-201ENST00000453847 193 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AC007967.1-201ENST00000455422 1159 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 NAP1L1P3-201ENST00000462291 880 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 RPL32P14-201ENST00000463196 378 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 AC078785.3-201ENST00000476607 425 ntBASIC3.75□□□□□ -1.81
CLDN3O15551 ACTG1P13-201ENST00000486987 1043 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms