Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC126121.1-201ENST00000482313 553 ntBASIC3.64□□□□□ -1.83
MSH4O15457 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.64□□□□□ -1.83
MSH4O15457 OR5H3P-201ENST00000502817 919 ntBASIC3.64□□□□□ -1.83
MSH4O15457 AC098799.1-201ENST00000504752 800 ntBASIC3.64□□□□□ -1.83
MSH4O15457 RN7SKP96-201ENST00000516948 297 ntBASIC3.64□□□□□ -1.83
MSH4O15457 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.64□□□□□ -1.83
MSH4O15457 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.64□□□□□ -1.83
MSH4O15457 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.64□□□□□ -1.83
MSH4O15457 AP003717.3-201ENST00000544832 1180 ntBASIC3.64□□□□□ -1.83
MSH4O15457 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH4O15457 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH4O15457 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH4O15457 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.64□□□□□ -1.83
MSH4O15457 AC100793.4-201ENST00000613683 429 ntBASIC3.64□□□□□ -1.83
MSH4O15457 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.64□□□□□ -1.83
MSH4O15457 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.64□□□□□ -1.83
MSH4O15457 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
MSH4O15457 XPOTP1-201ENST00000443317 2398 ntBASIC3.63□□□□□ -1.83
MSH4O15457 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 SNORA9-201ENST00000384215 133 ntBASIC3.63□□□□□ -1.83
MSH4O15457 Z98941.1-201ENST00000407764 100 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH4O15457 AC019070.1-201ENST00000415008 1024 ntBASIC3.63□□□□□ -1.83
MSH4O15457 NUP35P2-201ENST00000416748 943 ntBASIC3.63□□□□□ -1.83
MSH4O15457 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.63□□□□□ -1.83
MSH4O15457 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 BX679664.1-201ENST00000434429 253 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 AC092170.1-201ENST00000440211 356 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH4O15457 RPS3AP12-201ENST00000443616 753 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AC233982.1-201ENST00000451247 436 ntBASIC3.63□□□□□ -1.83
MSH4O15457 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.63□□□□□ -1.83
MSH4O15457 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH4O15457 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH4O15457 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH4O15457 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 SERPINE4P-201ENST00000554978 281 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.63□□□□□ -1.83
MSH4O15457 MIR5004-201ENST00000579078 107 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AC005776.1-201ENST00000603164 290 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AL365503.1-201ENST00000605247 905 ntBASIC3.63□□□□□ -1.83
MSH4O15457 RMST_8.1-201ENST00000610287 165 ntBASIC3.63□□□□□ -1.83
MSH4O15457 AC026422.1-201ENST00000623961 452 ntBASIC3.63□□□□□ -1.83
MSH4O15457 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.63□□□□□ -1.83
MSH4O15457 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
MSH4O15457 PWAR6-201ENST00000552334 4618 ntBASIC3.63□□□□□ -1.83
MSH4O15457 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MSH4O15457 AC007496.3-201ENST00000624987 3443 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC016716.1-201ENST00000265882 708 ntBASIC3.62□□□□□ -1.83
MSH4O15457 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.62□□□□□ -1.83
MSH4O15457 SNORA38.1-201ENST00000364172 131 ntBASIC3.62□□□□□ -1.83
MSH4O15457 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MSH4O15457 MIR124-3-201ENST00000384866 87 ntBASIC3.62□□□□□ -1.83
MSH4O15457 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
MSH4O15457 RNA5SP239-201ENST00000410218 129 ntBASIC3.62□□□□□ -1.83
MSH4O15457 RNU2-21P-201ENST00000410368 188 ntBASIC3.62□□□□□ -1.83
MSH4O15457 RNU4-47P-201ENST00000410876 114 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.62□□□□□ -1.83
MSH4O15457 GLRXP1-201ENST00000423261 334 ntBASIC3.62□□□□□ -1.83
MSH4O15457 UBE2V1P1-201ENST00000430836 445 ntBASIC3.62□□□□□ -1.83
MSH4O15457 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MSH4O15457 AC006028.1-201ENST00000438379 402 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC004865.1-201ENST00000442276 1003 ntBASIC3.62□□□□□ -1.83
MSH4O15457 RPL23AP15-201ENST00000450202 459 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC008280.2-201ENST00000455473 307 ntBASIC3.62□□□□□ -1.83
MSH4O15457 RPL21P71-201ENST00000465598 459 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.62□□□□□ -1.83
MSH4O15457 AC109925.1-201ENST00000478069 331 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.62□□□□□ -1.83
MSH4O15457 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.62□□□□□ -1.83
MSH4O15457 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.62□□□□□ -1.83
MSH4O15457 AC008885.2-201ENST00000509506 930 ntBASIC3.62□□□□□ -1.83
MSH4O15457 RN7SKP57-201ENST00000517248 293 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AP001636.2-201ENST00000525517 696 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.62□□□□□ -1.83
MSH4O15457 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
MSH4O15457 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.62□□□□□ -1.83
MSH4O15457 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MSH4O15457 AL136520.1-202ENST00000555494 763 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC093510.2-201ENST00000562820 896 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC095057.3-201ENST00000567102 1157 ntBASIC3.62□□□□□ -1.83
MSH4O15457 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.62□□□□□ -1.83
MSH4O15457 VN1R79P-201ENST00000593540 513 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC098483.2-201ENST00000603158 454 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC091488.1-201ENST00000604239 660 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC026741.1-201ENST00000605892 482 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AC112503.2-201ENST00000609005 552 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AL359535.1-201ENST00000612100 1087 ntBASIC3.62□□□□□ -1.83
MSH4O15457 U7.8-201ENST00000619968 63 ntBASIC3.62□□□□□ -1.83
MSH4O15457 AF117829.1-206ENST00000621883 3802 ntBASIC3.62□□□□□ -1.83
MSH4O15457 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 326.9 ms