Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CUX2O14529 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.08□□□□□ -1.6
CUX2O14529 AL590410.1-201ENST00000617925 333 ntBASIC5.08□□□□□ -1.6
CUX2O14529 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUX2O14529 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CUX2O14529 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CUX2O14529 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CUX2O14529 AL161781.1-201ENST00000354277 403 ntBASIC5.07□□□□□ -1.6
CUX2O14529 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.07□□□□□ -1.6
CUX2O14529 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.07□□□□□ -1.6
CUX2O14529 AC127526.1-201ENST00000417526 366 ntBASIC5.07□□□□□ -1.6
CUX2O14529 UBE2V2P3-201ENST00000433562 437 ntBASIC5.07□□□□□ -1.6
CUX2O14529 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CUX2O14529 PPIAP17-201ENST00000438507 471 ntBASIC5.07□□□□□ -1.6
CUX2O14529 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.07□□□□□ -1.6
CUX2O14529 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.07□□□□□ -1.6
CUX2O14529 EIF1AXP2-201ENST00000555940 413 ntBASIC5.07□□□□□ -1.6
CUX2O14529 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.07□□□□□ -1.6
CUX2O14529 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC5.07□□□□□ -1.6
CUX2O14529 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.07□□□□□ -1.6
CUX2O14529 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CUX2O14529 MIR423-201ENST00000362201 94 ntBASIC5.07□□□□□ -1.6
CUX2O14529 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
CUX2O14529 RNU6-1263P-201ENST00000384601 106 ntBASIC5.07□□□□□ -1.6
CUX2O14529 ATF1P1-201ENST00000406040 927 ntBASIC5.07□□□□□ -1.6
CUX2O14529 RNA5SP425-201ENST00000410336 112 ntBASIC5.07□□□□□ -1.6
CUX2O14529 AC107081.1-201ENST00000414975 361 ntBASIC5.07□□□□□ -1.6
CUX2O14529 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.07□□□□□ -1.6
CUX2O14529 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.07□□□□□ -1.6
CUX2O14529 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.07□□□□□ -1.6
CUX2O14529 AC011602.1-201ENST00000546484 331 ntBASIC5.07□□□□□ -1.6
CUX2O14529 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.07□□□□□ -1.6
CUX2O14529 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUX2O14529 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUX2O14529 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CUX2O14529 AC017002.4-201ENST00000604721 1525 ntBASIC5.06□□□□□ -1.6
CUX2O14529 CYCSP45-201ENST00000402289 315 ntBASIC5.06□□□□□ -1.6
CUX2O14529 SNORA79B-201ENST00000410557 148 ntBASIC5.06□□□□□ -1.6
CUX2O14529 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.06□□□□□ -1.6
CUX2O14529 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.06□□□□□ -1.6
CUX2O14529 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.06□□□□□ -1.6
CUX2O14529 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.06□□□□□ -1.6
CUX2O14529 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.06□□□□□ -1.6
CUX2O14529 AC010401.1-201ENST00000463867 348 ntBASIC5.06□□□□□ -1.6
CUX2O14529 OR4K7P-201ENST00000580232 945 ntBASIC5.06□□□□□ -1.6
CUX2O14529 AL365503.1-201ENST00000605247 905 ntBASIC5.06□□□□□ -1.6
CUX2O14529 AL133370.2-201ENST00000619934 439 ntBASIC5.06□□□□□ -1.6
CUX2O14529 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CUX2O14529 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CUX2O14529 RNU6-891P-201ENST00000384280 111 ntBASIC5.05□□□□□ -1.6
CUX2O14529 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.05□□□□□ -1.6
CUX2O14529 GLRXP1-201ENST00000423261 334 ntBASIC5.05□□□□□ -1.6
CUX2O14529 AL049610.1-201ENST00000423374 372 ntBASIC5.05□□□□□ -1.6
CUX2O14529 NPM1P24-201ENST00000428039 894 ntBASIC5.05□□□□□ -1.6
CUX2O14529 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.05□□□□□ -1.6
CUX2O14529 RPL12P26-201ENST00000452430 487 ntBASIC5.05□□□□□ -1.6
CUX2O14529 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.05□□□□□ -1.6
CUX2O14529 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.05□□□□□ -1.6
CUX2O14529 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CUX2O14529 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.05□□□□□ -1.6
CUX2O14529 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.05□□□□□ -1.6
CUX2O14529 NTAN1P1-201ENST00000603150 646 ntBASIC5.05□□□□□ -1.6
CUX2O14529 AC117490.2-201ENST00000610042 594 ntBASIC5.05□□□□□ -1.6
CUX2O14529 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
CUX2O14529 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.04□□□□□ -1.6
CUX2O14529 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CUX2O14529 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.04□□□□□ -1.6
CUX2O14529 AC048351.1-201ENST00000420064 602 ntBASIC5.04□□□□□ -1.6
CUX2O14529 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.04□□□□□ -1.6
CUX2O14529 B3GNT2P1-201ENST00000434960 952 ntBASIC5.04□□□□□ -1.6
CUX2O14529 TPTE2P1-204ENST00000435256 593 ntBASIC5.04□□□□□ -1.6
CUX2O14529 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.04□□□□□ -1.6
CUX2O14529 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.04□□□□□ -1.6
CUX2O14529 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.04□□□□□ -1.6
CUX2O14529 AC006840.1-201ENST00000623069 542 ntBASIC5.04□□□□□ -1.6
CUX2O14529 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CUX2O14529 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC5.04□□□□□ -1.6
CUX2O14529 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CUX2O14529 SPATA2P1-201ENST00000431223 2055 ntBASIC5.04□□□□□ -1.6
CUX2O14529 MIR365B-201ENST00000362317 111 ntBASIC5.03□□□□□ -1.6
CUX2O14529 RNU6-76P-201ENST00000384060 104 ntBASIC5.03□□□□□ -1.6
CUX2O14529 MIR489-201ENST00000384923 84 ntBASIC5.03□□□□□ -1.6
CUX2O14529 AL138878.1-201ENST00000405131 347 ntBASIC5.03□□□□□ -1.6
CUX2O14529 RANP4-201ENST00000413361 655 ntBASIC5.03□□□□□ -1.6
CUX2O14529 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CUX2O14529 AL139415.2-201ENST00000431968 163 ntBASIC5.03□□□□□ -1.6
CUX2O14529 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.03□□□□□ -1.6
CUX2O14529 HMGN2P23-201ENST00000456759 269 ntBASIC5.03□□□□□ -1.6
CUX2O14529 RPL23AP11-201ENST00000475260 469 ntBASIC5.03□□□□□ -1.6
CUX2O14529 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.03□□□□□ -1.6
CUX2O14529 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.03□□□□□ -1.6
CUX2O14529 SCGB1D5P-201ENST00000515134 247 ntBASIC5.03□□□□□ -1.6
CUX2O14529 RNA5SP148-201ENST00000516527 94 ntBASIC5.03□□□□□ -1.6
CUX2O14529 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC5.03□□□□□ -1.6
CUX2O14529 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.03□□□□□ -1.6
CUX2O14529 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.03□□□□□ -1.6
CUX2O14529 AP001004.1-201ENST00000582468 324 ntBASIC5.03□□□□□ -1.6
CUX2O14529 AL353997.5-201ENST00000618886 171 ntBASIC5.03□□□□□ -1.6
CUX2O14529 U7.8-201ENST00000619968 63 ntBASIC5.03□□□□□ -1.6
CUX2O14529 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms