Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.51□□□□□ -2.01
SDCBPO00560 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC2.51□□□□□ -2.01
SDCBPO00560 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.51□□□□□ -2.01
SDCBPO00560 OR8B1P-202ENST00000641132 1178 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
SDCBPO00560 AC009487.2-201ENST00000420969 6821 ntBASIC2.51□□□□□ -2.01
SDCBPO00560 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.51□□□□□ -2.01
SDCBPO00560 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SDCBPO00560 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SDCBPO00560 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
SDCBPO00560 AC073325.2-201ENST00000339545 159 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 MIR22-201ENST00000362190 85 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 RPS3AP25-201ENST00000411660 793 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.5□□□□□ -2.01
SDCBPO00560 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.5□□□□□ -2.01
SDCBPO00560 DPPA2P1-201ENST00000428060 556 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.5□□□□□ -2.01
SDCBPO00560 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.5□□□□□ -2.01
SDCBPO00560 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.5□□□□□ -2.01
SDCBPO00560 RPL7P49-201ENST00000471402 708 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 RPS29P2-201ENST00000479278 136 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.5□□□□□ -2.01
SDCBPO00560 PRELID3BP6-201ENST00000503839 571 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC010285.3-201ENST00000511668 676 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.5□□□□□ -2.01
SDCBPO00560 OR5G4P-201ENST00000525251 760 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.5□□□□□ -2.01
SDCBPO00560 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 AC005951.1-201ENST00000576706 485 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.5□□□□□ -2.01
SDCBPO00560 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.5□□□□□ -2.01
SDCBPO00560 HMGB1P51-201ENST00000605166 638 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC112503.1-201ENST00000608436 391 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC069234.5-201ENST00000611056 416 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC244100.1-202ENST00000621554 382 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AC009039.2-201ENST00000624524 529 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.5□□□□□ -2.01
SDCBPO00560 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SDCBPO00560 AC010733.2-201ENST00000589496 5702 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.5□□□□□ -2.01
SDCBPO00560 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDCBPO00560 AL157700.1-201ENST00000561973 1432 ntBASIC2.5□□□□□ -2.01
SDCBPO00560 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC2.49□□□□□ -2.01
SDCBPO00560 ZNF33CP-201ENST00000432492 2030 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.49□□□□□ -2.01
SDCBPO00560 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SDCBPO00560 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SDCBPO00560 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.49□□□□□ -2.01
SDCBPO00560 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SDCBPO00560 RNA5SP391-201ENST00000363456 119 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 SNORA38.1-201ENST00000364172 131 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 RNU6-31P-201ENST00000384388 108 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 MIR181A2-201ENST00000384863 110 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 MIR34B-201ENST00000385076 84 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AL353692.2-201ENST00000407054 335 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 U3.42-201ENST00000408746 214 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.49□□□□□ -2.01
SDCBPO00560 RPL26P37-201ENST00000411983 438 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 XKRYP4-201ENST00000414395 483 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.49□□□□□ -2.01
SDCBPO00560 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.49□□□□□ -2.01
SDCBPO00560 RPL7P46-201ENST00000425129 740 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.49□□□□□ -2.01
SDCBPO00560 AC007563.3-201ENST00000433233 371 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 RPS29P6-201ENST00000438196 145 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.49□□□□□ -2.01
SDCBPO00560 AL157827.1-201ENST00000447622 132 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 XKRYP5-201ENST00000449659 483 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.49□□□□□ -2.01
SDCBPO00560 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.49□□□□□ -2.01
SDCBPO00560 RN7SL807P-201ENST00000470923 297 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AL358832.1-201ENST00000497800 389 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC2.49□□□□□ -2.01
SDCBPO00560 AC023141.12-201ENST00000512399 199 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 ACTR6P1-201ENST00000514311 1104 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.49□□□□□ -2.01
SDCBPO00560 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.49□□□□□ -2.01
SDCBPO00560 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.49□□□□□ -2.01
SDCBPO00560 MTND4LP24-201ENST00000572277 291 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 MIR4444-1-201ENST00000581696 74 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 MIR4444-2-201ENST00000584390 74 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 AL031985.2-201ENST00000600955 480 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.49□□□□□ -2.01
SDCBPO00560 MIR7973-1-201ENST00000614683 76 ntBASIC2.49□□□□□ -2.01
SDCBPO00560 LRRC77P-213ENST00000637727 880 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms