Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.71□□□□□ -1.66
FOXN3O00409 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN3O00409 AC079587.1-201ENST00000603846 277 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN3O00409 AL139286.1-201ENST00000604465 483 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC010680.4-201ENST00000605334 543 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AL031775.1-201ENST00000607014 887 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC135507.1-201ENST00000607214 561 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC013562.2-201ENST00000611632 603 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC009237.17-201ENST00000618111 748 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.71□□□□□ -1.66
FOXN3O00409 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN3O00409 AP005019.3-201ENST00000620418 560 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 AC018816.2-201ENST00000621460 353 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.71□□□□□ -1.66
FOXN3O00409 ZNF734P-201ENST00000419494 1534 ntBASIC4.71□□□□□ -1.66
FOXN3O00409 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
FOXN3O00409 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
FOXN3O00409 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.71□□□□□ -1.66
FOXN3O00409 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 ZNF33CP-201ENST00000432492 2030 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 LINC00561-201ENST00000565815 2738 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 AC008033.1-201ENST00000216407 1162 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC103591.2-201ENST00000265259 766 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 RNU1-15P-201ENST00000353977 144 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 RNA5SP505-201ENST00000364748 108 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC136624.1-201ENST00000400791 413 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 HMGB1P17-201ENST00000403495 628 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 RPS16P5-201ENST00000406501 404 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 MIR1911-201ENST00000410783 80 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 TMSB10P2-201ENST00000416049 131 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC069213.2-201ENST00000420238 366 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 FNDC3CP-201ENST00000420795 1155 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 PSMA6P3-201ENST00000428242 164 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 RPL23AP1-201ENST00000428990 471 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.7□□□□□ -1.66
FOXN3O00409 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.7□□□□□ -1.66
FOXN3O00409 HSPE1P28-201ENST00000443139 211 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 DHFRP3-201ENST00000455595 559 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AL024509.2-201ENST00000493462 493 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC109458.1-201ENST00000508858 316 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC091965.2-201ENST00000512324 613 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 AC013828.2-201ENST00000532487 235 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 MIR7154-201ENST00000620673 73 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 PABPC1P9-201ENST00000426076 1612 ntBASIC4.7□□□□□ -1.66
FOXN3O00409 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
FOXN3O00409 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
FOXN3O00409 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
FOXN3O00409 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.7□□□□□ -1.66
FOXN3O00409 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
FOXN3O00409 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.69□□□□□ -1.66
FOXN3O00409 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
FOXN3O00409 AC105074.1-201ENST00000623380 3095 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN3O00409 RPL23AP57-201ENST00000332361 466 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 SNORD66.1-201ENST00000391230 76 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 RNA5SP146-201ENST00000410743 123 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 RN7SKP216-201ENST00000411050 312 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 AC109780.2-201ENST00000413467 845 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 RPL31P2-201ENST00000413849 377 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 TPMTP2-201ENST00000414372 726 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.69□□□□□ -1.66
FOXN3O00409 AL590139.1-201ENST00000416267 400 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 LARP1BP3-201ENST00000437229 869 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 MTND5P14-201ENST00000441481 1267 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.69□□□□□ -1.66
FOXN3O00409 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.69□□□□□ -1.66
FOXN3O00409 USP9YP34-201ENST00000453983 808 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AC079804.1-201ENST00000461922 436 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 RPL35AP15-201ENST00000468042 339 ntBASIC4.69□□□□□ -1.66
FOXN3O00409 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms