Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.98□□□□□ -1.77
O00370 HIGD1AP3-201ENST00000515857 278 ntBASIC3.98□□□□□ -1.77
O00370 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.98□□□□□ -1.77
O00370 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
O00370 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.98□□□□□ -1.77
O00370 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.98□□□□□ -1.77
O00370 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.98□□□□□ -1.77
O00370 MTND3P13-201ENST00000574391 343 ntBASIC3.98□□□□□ -1.77
O00370 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.98□□□□□ -1.77
O00370 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.98□□□□□ -1.77
O00370 AL450336.1-201ENST00000605180 586 ntBASIC3.98□□□□□ -1.77
O00370 RNU1-30P-201ENST00000606575 163 ntBASIC3.98□□□□□ -1.77
O00370 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
O00370 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.98□□□□□ -1.77
O00370 AC008725.1-201ENST00000605123 2263 ntBASIC3.98□□□□□ -1.77
O00370 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
O00370 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
O00370 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
O00370 AC073073.2-201ENST00000609827 2578 ntBASIC3.98□□□□□ -1.77
O00370 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
O00370 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
O00370 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
O00370 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
O00370 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.97□□□□□ -1.77
O00370 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
O00370 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
O00370 MIR134-201ENST00000385258 73 ntBASIC3.97□□□□□ -1.77
O00370 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
O00370 OR51A3P-201ENST00000413596 924 ntBASIC3.97□□□□□ -1.77
O00370 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
O00370 OR4K6P-201ENST00000416478 897 ntBASIC3.97□□□□□ -1.77
O00370 RPS3AP37-201ENST00000419176 745 ntBASIC3.97□□□□□ -1.77
O00370 AC027644.1-201ENST00000419595 298 ntBASIC3.97□□□□□ -1.77
O00370 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.97□□□□□ -1.77
O00370 HMGB3P5-201ENST00000428894 612 ntBASIC3.97□□□□□ -1.77
O00370 EEF1A1P39-201ENST00000440791 250 ntBASIC3.97□□□□□ -1.77
O00370 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.97□□□□□ -1.77
O00370 HMGB3P6-201ENST00000444896 598 ntBASIC3.97□□□□□ -1.77
O00370 RPL7P59-201ENST00000447700 943 ntBASIC3.97□□□□□ -1.77
O00370 AC006480.1-201ENST00000449887 378 ntBASIC3.97□□□□□ -1.77
O00370 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.97□□□□□ -1.77
O00370 ZNF886P-201ENST00000450781 723 ntBASIC3.97□□□□□ -1.77
O00370 MRPL42P4-201ENST00000453267 443 ntBASIC3.97□□□□□ -1.77
O00370 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.97□□□□□ -1.77
O00370 AC005410.1-202ENST00000460347 485 ntBASIC3.97□□□□□ -1.77
O00370 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.97□□□□□ -1.77
O00370 TMED11P-201ENST00000479478 690 ntBASIC3.97□□□□□ -1.77
O00370 DYNLL1P6-201ENST00000503440 264 ntBASIC3.97□□□□□ -1.77
O00370 AC084024.2-201ENST00000503480 791 ntBASIC3.97□□□□□ -1.77
O00370 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.97□□□□□ -1.77
O00370 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.97□□□□□ -1.77
O00370 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.97□□□□□ -1.77
O00370 AL121576.1-201ENST00000556055 276 ntBASIC3.97□□□□□ -1.77
O00370 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.97□□□□□ -1.77
O00370 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.97□□□□□ -1.77
O00370 MIR5187-201ENST00000583479 76 ntBASIC3.97□□□□□ -1.77
O00370 AC007687.1-201ENST00000602704 304 ntBASIC3.97□□□□□ -1.77
O00370 AL009028.1-201ENST00000604895 802 ntBASIC3.97□□□□□ -1.77
O00370 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.97□□□□□ -1.77
O00370 AC087821.2-201ENST00000637086 450 ntBASIC3.97□□□□□ -1.77
O00370 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
O00370 MAPK10-372ENST00000641954 3413 ntBASIC3.97□□□□□ -1.77
O00370 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
O00370 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
O00370 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
O00370 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.96□□□□□ -1.77
O00370 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.77
O00370 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
O00370 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
O00370 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 TNPO1P3-201ENST00000436471 2662 ntBASIC3.96□□□□□ -1.78
O00370 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.96□□□□□ -1.78
O00370 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 RNU1-64P-201ENST00000365443 163 ntBASIC3.96□□□□□ -1.78
O00370 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 RNA5SP424-201ENST00000390988 115 ntBASIC3.96□□□□□ -1.78
O00370 ANAPC10P1-201ENST00000395991 556 ntBASIC3.96□□□□□ -1.78
O00370 RPL7P60-201ENST00000397636 735 ntBASIC3.96□□□□□ -1.78
O00370 DSTNP4-201ENST00000399472 474 ntBASIC3.96□□□□□ -1.78
O00370 MTCO1P56-201ENST00000401674 224 ntBASIC3.96□□□□□ -1.78
O00370 RPS3AP25-201ENST00000411660 793 ntBASIC3.96□□□□□ -1.78
O00370 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.96□□□□□ -1.78
O00370 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.96□□□□□ -1.78
O00370 SSR1P2-201ENST00000415208 787 ntBASIC3.96□□□□□ -1.78
O00370 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.96□□□□□ -1.78
O00370 MTCO1P3-201ENST00000429327 192 ntBASIC3.96□□□□□ -1.78
O00370 NDUFB1P1-201ENST00000435191 180 ntBASIC3.96□□□□□ -1.78
O00370 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.96□□□□□ -1.78
O00370 RAB11AP1-201ENST00000442978 646 ntBASIC3.96□□□□□ -1.78
O00370 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
O00370 MTCO3P35-201ENST00000485582 781 ntBASIC3.96□□□□□ -1.78
O00370 AC005921.1-201ENST00000510589 286 ntBASIC3.96□□□□□ -1.78
O00370 AC023141.12-201ENST00000512399 199 ntBASIC3.96□□□□□ -1.78
O00370 RN7SKP83-201ENST00000516512 178 ntBASIC3.96□□□□□ -1.78
O00370 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
O00370 AP001372.4-201ENST00000524889 472 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms