Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU4-44P-201ENST00000363050 141 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 Y_RNA.582-201ENST00000391023 95 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 Y_RNA.598-201ENST00000410480 95 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 USP9YP13-201ENST00000417797 480 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AIMP1P1-201ENST00000418670 937 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AL356583.2-201ENST00000426536 280 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC096632.1-201ENST00000427395 310 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 LSM1P1-201ENST00000438629 273 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 MTND1P1-201ENST00000445453 368 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 EEF1A1P1-201ENST00000447052 739 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AL591623.2-201ENST00000449978 222 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC093392.2-201ENST00000450682 337 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC026410.2-201ENST00000460281 156 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 KLF3P2-201ENST00000465138 268 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 RPS23P7-201ENST00000466210 444 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC023424.2-201ENST00000493479 777 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 ATP5J2P6-201ENST00000565203 266 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC084783.1-201ENST00000565846 910 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 MIR5697-201ENST00000578045 78 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC007684.1-201ENST00000609671 477 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC109347.2-201ENST00000610220 349 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AL359535.1-201ENST00000612100 1087 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AL139089.1-201ENST00000620372 975 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 SEPT14P19-203ENST00000633205 211 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 U6.101-201ENST00000637707 76 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC009229.4-201ENST00000623854 1947 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC139713.2-215ENST00000641428 5037 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC006378.2-201ENST00000623178 2476 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 OR56B2P-202ENST00000641377 2453 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RNU1-20P-201ENST00000363314 162 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RNU5A-6P-201ENST00000384136 116 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RNU6-297P-201ENST00000384636 107 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AL023807.1-201ENST00000407932 359 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RN7SKP266-201ENST00000410232 287 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RNU6-248P-201ENST00000410720 107 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RNU6-603P-201ENST00000411403 107 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 ELOCP19-201ENST00000411919 318 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RPS3AP9-201ENST00000417027 792 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 MTND4LP11-201ENST00000422184 280 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 DNAJC19P4-201ENST00000440115 345 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC244505.5-201ENST00000443639 207 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 USP9YP12-201ENST00000450481 570 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 snoU109.1-201ENST00000459339 135 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RPL30P11-201ENST00000495304 339 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 TMEM251P1-201ENST00000503717 318 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC104986.1-201ENST00000517978 436 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RPL21P7-201ENST00000557463 483 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 MIR544B-201ENST00000582372 78 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 BNIP3P8-201ENST00000597863 560 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 RPL7P50-201ENST00000600588 727 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AL356218.2-201ENST00000605264 187 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC008966.2-201ENST00000606157 453 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC108479.2-201ENST00000617314 601 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC068722.2-201ENST00000618734 544 ntBASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.31□□□□□ -1.56
PTPDC1A2A3K4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms