Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC138915.3-201ENST00000562908 1389 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC025263.3-201ENST00000622965 1396 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU4-35P-201ENST00000362588 141 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNA5SP42-201ENST00000364278 115 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNVU1-3-201ENST00000364313 161 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNA5SP235-201ENST00000365411 114 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MIR183-201ENST00000384958 110 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 EI24P2-201ENST00000397776 1076 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNA5SP129-201ENST00000410276 118 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AIMP1P1-201ENST00000418670 937 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OFD1P18Y-201ENST00000420889 959 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC005002.1-201ENST00000447458 540 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC084357.1-201ENST00000473404 255 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SETP12-201ENST00000514068 805 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU2-27P-201ENST00000516185 142 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AP000926.4-201ENST00000527351 454 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OR5AP1P-201ENST00000529730 940 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AP003385.6-201ENST00000531603 374 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC104229.1-201ENST00000561364 255 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC106734.1-201ENST00000568646 663 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC012182.1-201ENST00000570133 895 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC025588.3-201ENST00000604182 274 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC013468.1-201ENST00000608680 598 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC073073.2-201ENST00000609827 2578 ntBASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MFSD8-213ENST00000641134 1327 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CR381670.1-201ENST00000624291 1693 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNA5SP295-201ENST00000362655 121 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU6-283P-201ENST00000364788 107 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RNU6-441P-201ENST00000384545 106 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RPL23AP47-201ENST00000408017 460 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC008173.1-201ENST00000418901 264 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL159987.2-201ENST00000432754 307 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SKP1P1-201ENST00000438081 489 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 SLC31A1P1-201ENST00000451221 567 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RPL26P28-201ENST00000451325 435 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 HMGN3P1-201ENST00000453847 193 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 HMGB1P15-201ENST00000453854 435 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RN7SL594P-201ENST00000470590 287 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 RPL23AP73-201ENST00000492507 471 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 OR4A45P-201ENST00000529954 901 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 CCDC58P3-201ENST00000590792 430 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AL513477.2-201ENST00000607858 568 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 AC016542.1-201ENST00000608259 493 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ZNF826P-207ENST00000622273 1910 ntBASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRBV11-1A0A0K0K1C0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms