Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL049539.1-201ENST00000611964 459 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC092184.1-201ENST00000625042 715 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 AC111188.2-201ENST00000529697 1387 ntBASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
KCNIP3Q9Y2W7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 SNORA73.2-201ENST00000364946 201 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-1181P-201ENST00000384191 106 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 ELOCP19-201ENST00000411919 318 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 RBMY2KP-201ENST00000418221 992 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AL590762.4-201ENST00000425885 253 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 RPL21P66-201ENST00000426566 466 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC013262.1-201ENST00000426710 252 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC092634.2-201ENST00000428146 1010 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AP000949.1-201ENST00000438328 629 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC241584.1-201ENST00000438469 1241 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 HMGB1P12-201ENST00000438594 598 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 ARF4P4-201ENST00000439608 520 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AL662791.1-201ENST00000441992 928 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 snoU13.24-201ENST00000458998 104 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 PABPC1P3-201ENST00000469174 459 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 VPS26AP1-201ENST00000483197 979 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC013356.1-201ENST00000489027 564 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 RNA5SP208-201ENST00000516156 78 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 SNORA31.20-201ENST00000517111 133 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 NDUFA5P2-201ENST00000519723 344 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC019227.1-201ENST00000526902 510 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AP003066.2-201ENST00000529375 555 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 TRAV15-201ENST00000556680 249 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC005951.1-201ENST00000576706 485 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC090330.1-201ENST00000588646 764 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC234771.5-201ENST00000600161 514 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AL356218.2-201ENST00000605264 187 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AP000894.4-201ENST00000610185 483 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 MIR6729-201ENST00000618194 65 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC009318.4-201ENST00000620496 486 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
KCNIP3Q9Y2W7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNA5SP258-201ENST00000362750 119 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-236P-201ENST00000363886 106 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-821P-201ENST00000390995 107 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-55P-201ENST00000411092 107 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNU6-954P-201ENST00000411355 107 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 RNU2-71P-201ENST00000411395 189 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AL024507.1-201ENST00000412741 274 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 SDCBPP2-201ENST00000424643 885 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 Z93242.1-201ENST00000427102 353 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 SETD6P1-201ENST00000444575 317 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC125238.1-201ENST00000448842 249 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 MRPS31P2-201ENST00000451581 518 ntBASIC3.06□□□□□ -1.92
KCNIP3Q9Y2W7 AC244505.3-201ENST00000454598 187 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms