Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 IGKV3-31-201ENST00000523109 329 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 DEFB122-202ENST00000569013 197 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 AC006111.3-201ENST00000622137 383 ntBASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHANK2Q9UPX8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 AC078785.3-201ENST00000476607 425 ntBASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 AC245166.1-201ENST00000521012 253 ntBASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 MTCO1P9-201ENST00000505577 1534 ntBASIC4.16□□□□□ -1.74
SHANK2Q9UPX8 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 RNU6-482P-201ENST00000391068 107 ntBASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 AC109329.2-201ENST00000519658 482 ntBASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 AC009101.1-201ENST00000568135 242 ntBASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 AC025754.2-201ENST00000606491 432 ntBASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 MIR6817-201ENST00000615588 66 ntBASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHANK2Q9UPX8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 MIR512-1-201ENST00000384913 84 ntBASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 MTCO1P51-201ENST00000427672 1060 ntBASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 HMGB3P8-201ENST00000449709 577 ntBASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 RN7SL75P-201ENST00000461926 281 ntBASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 AC018797.3-201ENST00000513388 1241 ntBASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 RN7SKP283-201ENST00000517197 270 ntBASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.14□□□□□ -1.75
SHANK2Q9UPX8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AL353743.4-201ENST00000422653 1547 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 MIR26A1-201ENST00000362205 77 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 RNA5SP68-201ENST00000363885 119 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 B3GNT2P1-201ENST00000434960 952 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AP001646.1-201ENST00000527936 915 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 SERPINE4P-201ENST00000554978 281 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AL355493.4-201ENST00000618530 292 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 AC241585.2-209ENST00000638217 143 ntBASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SHANK2Q9UPX8 RNU1-35P-201ENST00000362782 153 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 UBE2D3P1-201ENST00000436669 444 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 AC108210.2-201ENST00000503681 201 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 AC006445.2-201ENST00000510061 472 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 AC015712.3-201ENST00000559380 164 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 HSPA8P4-201ENST00000511877 1920 ntBASIC4.12□□□□□ -1.75
SHANK2Q9UPX8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 HMGB3P12-201ENST00000438745 556 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC125238.1-201ENST00000448842 249 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC019227.1-201ENST00000526902 510 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC007424.1-203ENST00000554613 687 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AP006437.1-201ENST00000641440 3685 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC007342.7-201ENST00000624610 2337 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AL356057.3-201ENST00000402607 340 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 RPL23AP31-201ENST00000456160 467 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 AC092628.2-201ENST00000622492 339 ntBASIC4.11□□□□□ -1.75
SHANK2Q9UPX8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 SNORA70E-201ENST00000384492 135 ntBASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 AL591806.2-201ENST00000433122 173 ntBASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 SNORA31.21-201ENST00000517180 77 ntBASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 FAM60DP-201ENST00000524174 632 ntBASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.1□□□□□ -1.75
SHANK2Q9UPX8 AL356274.1-201ENST00000617064 410 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms