Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC010329.1-201ENST00000593903 8328 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-545P-201ENST00000362681 104 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-1013P-201ENST00000384180 107 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 Y_RNA.496-201ENST00000384444 101 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 MIR585-201ENST00000384887 94 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 Y_RNA.646-201ENST00000410980 101 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC062016.2-201ENST00000420950 676 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AL133173.1-201ENST00000423458 397 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC099670.2-201ENST00000435130 321 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 RNU7-63P-201ENST00000459054 62 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 RPL7P22-201ENST00000466005 733 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC105384.2-201ENST00000508433 640 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 POU5F1P7-201ENST00000508759 541 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AP001804.3-201ENST00000525146 880 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 CYCSP2-201ENST00000558168 301 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AL390726.5-202ENST00000564800 256 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 MIR3942-201ENST00000585264 109 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 RPL26P30-202ENST00000602923 645 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AL031176.1-201ENST00000604554 466 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC024940.4-201ENST00000605507 246 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-84P-201ENST00000607737 102 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AC011815.3-201ENST00000624194 473 ntBASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.21□□□□□ -1.25
PDZRN3Q9UPQ7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.25
PDZRN3Q9UPQ7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
PDZRN3Q9UPQ7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDZRN3Q9UPQ7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.25
PDZRN3Q9UPQ7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.25
PDZRN3Q9UPQ7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RNA5SP453-201ENST00000362503 119 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RNA5SP514-201ENST00000363717 111 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RHOT1P2-201ENST00000366423 333 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 Y_RNA.483-201ENST00000384380 101 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AL034403.1-201ENST00000399414 885 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 PPIAP9-201ENST00000403866 498 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RN7SKP213-201ENST00000410746 298 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RN7SKP216-201ENST00000411050 312 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-954P-201ENST00000411355 107 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC108032.1-201ENST00000416706 207 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 EIF4EP1-201ENST00000422311 642 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 COX6CP15-201ENST00000426313 211 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 FO393419.3-201ENST00000428741 282 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 YWHAZP8-201ENST00000436935 731 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC023512.1-201ENST00000444513 499 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RPL18AP17-201ENST00000455326 198 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC104849.1-201ENST00000462623 405 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RPL39P38-201ENST00000467018 153 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 HMGB1P28-201ENST00000507778 552 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-1213P-201ENST00000517075 94 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 DEFB131D-201ENST00000526803 184 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC010620.2-201ENST00000600135 313 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AL355297.3-201ENST00000604082 446 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 AC104763.2-201ENST00000604179 382 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 RNU6-87P-201ENST00000607561 108 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 WWOX-217ENST00000620008 450 ntTSL 2 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 PLCE1P1-201ENST00000622094 305 ntBASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PDZRN3Q9UPQ7 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 CASC19-260ENST00000641828 2001 ntBASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.2□□□□□ -1.26
PDZRN3Q9UPQ7 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms