Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AL157700.1-201ENST00000561973 1432 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC074051.3-201ENST00000570238 358 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC025588.3-201ENST00000604182 274 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC007179.3-201ENST00000604976 235 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 BNIP3P19-201ENST00000605397 577 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC092354.2-201ENST00000607786 514 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 VN1R74P-201ENST00000613259 503 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC068880.4-201ENST00000623082 495 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC098679.5-201ENST00000624394 571 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC119674.1-207ENST00000641355 633 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 MFSD8-236ENST00000641509 4050 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 GABPAP-201ENST00000419271 1356 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 MTND5P31-201ENST00000419366 1374 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 SNORA31-201ENST00000362607 130 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 RNU6-263P-201ENST00000363811 107 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 RPL7P60-201ENST00000397636 735 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 MTCO3P31-201ENST00000405526 789 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC092638.1-201ENST00000411966 1275 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 RPL31P2-201ENST00000413849 377 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC244098.2-201ENST00000422068 99 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC233981.1-201ENST00000423224 461 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 IFNNP1-201ENST00000429219 553 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 PRDX3P3-201ENST00000447765 522 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC104978.1-201ENST00000449387 391 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 CYCSP35-201ENST00000451978 304 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 MTCO3P20-201ENST00000454926 688 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AL136097.1-201ENST00000456945 913 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 RPL7P47-201ENST00000497299 556 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC005921.1-201ENST00000510589 286 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 IGKV2-23-201ENST00000518729 323 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AP003355.1-201ENST00000518956 587 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AP004242.1-201ENST00000533701 349 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC092451.2-201ENST00000538746 658 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AL133457.1-201ENST00000564251 987 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC107954.1-201ENST00000565906 727 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC090616.5-202ENST00000582111 297 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC010591.1-201ENST00000603941 649 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC002487.1-201ENST00000604565 994 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AL161756.2-201ENST00000604597 246 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC018754.1-201ENST00000607486 925 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 AC105227.2-201ENST00000615075 605 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 U6.98-201ENST00000637157 84 ntBASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NPIPA1Q9UND3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 RNU5B-1-201ENST00000363286 116 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 RNA5SP72-201ENST00000364442 117 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 RNU4-78P-201ENST00000410940 126 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 LIPT1P1-201ENST00000415870 1186 ntBASIC3.38□□□□□ -1.87
NPIPA1Q9UND3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms