Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC090071.1-201ENST00000507713 644 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC090819.1-201ENST00000523800 1111 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC090330.1-201ENST00000588646 764 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 VN1R7P-201ENST00000619242 903 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC068620.4-201ENST00000636730 1182 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC111188.2-201ENST00000529697 1387 ntBASIC6.84□□□□□ -1.31
SHROOM4Q9ULL8 AC090229.1-201ENST00000590983 1609 ntBASIC6.84□□□□□ -1.32
SHROOM4Q9ULL8 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC007656.2-201ENST00000624902 4547 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC138393.1-206ENST00000540997 1886 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 MTND4P8-201ENST00000514997 1362 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 BTF3P8-201ENST00000414577 526 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 RPF2P1-201ENST00000424137 906 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC008065.1-201ENST00000428525 348 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC096638.2-201ENST00000434965 711 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 PTGES3P1-201ENST00000439531 483 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 NANOGNBP1-201ENST00000448444 480 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC244505.3-201ENST00000454598 187 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AP001992.1-205ENST00000462248 379 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 S100A11P2-201ENST00000467589 312 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC096576.1-201ENST00000489014 359 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 SNX5P1-201ENST00000505757 1041 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 TRAV15-201ENST00000556680 249 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AL022067.1-201ENST00000602426 454 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 AL139811.1-201ENST00000424779 2299 ntBASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SHROOM4Q9ULL8 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 MTND4P3-201ENST00000417829 541 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 HMGB3P20-201ENST00000417997 600 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 OSTCP5-201ENST00000425293 453 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 NPM1P13-201ENST00000452663 865 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 snoU13.7-201ENST00000459220 104 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AP000942.1-201ENST00000463969 747 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 RPL21P8-201ENST00000465083 535 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AP000893.1-201ENST00000474462 794 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AF186190.1-201ENST00000517470 480 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 LARP7P3-201ENST00000579888 337 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AL020997.3-201ENST00000602843 359 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 AP003485.1-201ENST00000625093 753 ntBASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
SHROOM4Q9ULL8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 SFR1P1-201ENST00000403720 688 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 RAB11AP1-201ENST00000442978 646 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 PTGES3P3-201ENST00000511479 482 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 RNU6-276P-201ENST00000516114 96 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 Vault.1-201ENST00000516474 102 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 PTP4A1P6-201ENST00000531034 478 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 AC006518.1-201ENST00000541449 943 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 AC022069.1-201ENST00000582910 658 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 AC069209.1-201ENST00000619282 651 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 AC110801.1-201ENST00000623590 212 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 SRP72P2-201ENST00000344851 1979 ntBASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
SHROOM4Q9ULL8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 RNA5SP432-201ENST00000362480 116 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC006116.10-201ENST00000591836 581 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC107294.1-201ENST00000609524 467 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 AC099654.8-201ENST00000637757 681 ntBASIC6.8□□□□□ -1.32
SHROOM4Q9ULL8 FAM157B-203ENST00000639350 358 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms