Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 ARL5AP4-201ENST00000430731 512 ntBASIC2.79□□□□□ -1.96
CCDC88CQ9P219 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 AC068714.1-201ENST00000559623 800 ntBASIC2.79□□□□□ -1.96
CCDC88CQ9P219 AC055876.1-202ENST00000567053 138 ntBASIC2.79□□□□□ -1.96
CCDC88CQ9P219 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 AC007566.2-201ENST00000603642 413 ntBASIC2.79□□□□□ -1.96
CCDC88CQ9P219 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC88CQ9P219 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 SNORA5B-201ENST00000363786 132 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 RNU6-7-201ENST00000364784 107 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 RNU6-8-201ENST00000365467 107 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC110754.1-201ENST00000399740 601 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 TRAPPC2P5-201ENST00000426293 308 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 NPM1P24-201ENST00000428039 894 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 USP9YP31-201ENST00000431405 881 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 CASP3P1-201ENST00000446037 609 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 TRAV31-201ENST00000502780 342 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 TRAV37-201ENST00000553906 342 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC034105.3-201ENST00000565294 442 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 LARP7P3-201ENST00000579888 337 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 PLCE1P1-201ENST00000622094 305 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC119674.1-212ENST00000641155 993 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AL079305.1-201ENST00000623159 3008 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC019097.1-201ENST00000424783 735 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 UQCRHP3-201ENST00000451503 251 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 HMGB1P25-201ENST00000468402 607 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 RN7SL20P-201ENST00000488827 297 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 KCTD9P5-201ENST00000504141 1170 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC88CQ9P219 CFTRP2-201ENST00000634304 199 ntBASIC2.78□□□□□ -1.96
CCDC88CQ9P219 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.78□□□□□ -1.97
CCDC88CQ9P219 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
CCDC88CQ9P219 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 XGY1-201ENST00000381172 446 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 MTCO3P21-201ENST00000430791 643 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AC093278.1-201ENST00000494700 600 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 NPM1P35-201ENST00000533043 868 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AC007619.2-201ENST00000605743 379 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 MIR7106-201ENST00000612419 65 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AC099506.2-201ENST00000623074 221 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AL137790.1-201ENST00000634283 177 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
CCDC88CQ9P219 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CCDC88CQ9P219 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 OR2AS1P-201ENST00000427827 319 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 RPL21P8-201ENST00000465083 535 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 RNU6-319P-201ENST00000516025 108 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 RNA5SP367-201ENST00000516557 118 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 NRBF2P5-201ENST00000603087 788 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC084373.1-201ENST00000603311 235 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AL049844.2-201ENST00000604280 628 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC007620.3-201ENST00000608131 497 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 AC008264.2-201ENST00000610193 3731 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC88CQ9P219 SNORA80A-201ENST00000363922 136 ntBASIC2.76□□□□□ -1.97
CCDC88CQ9P219 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms