Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC058791.1-201ENST00000608412 3198 ntBASIC3.64□□□□□ -1.83
NDE1Q9NXR1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NDE1Q9NXR1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RNU6-619P-201ENST00000365146 108 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 SNORD65.1-201ENST00000390889 71 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CYB5AP4-201ENST00000396692 399 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 PRELID3BP11-201ENST00000414230 479 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC245028.1-201ENST00000423259 256 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC009965.2-201ENST00000425328 970 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AL158071.1-201ENST00000430315 461 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC073143.1-201ENST00000436316 395 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 GTF2IP7-202ENST00000436677 309 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 MTCO2P20-201ENST00000437339 673 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 COX7BP2-201ENST00000437976 242 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC093155.1-201ENST00000440164 826 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC007327.1-201ENST00000447461 264 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RPS11P1-201ENST00000451072 473 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC078785.3-201ENST00000476607 425 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RPS4XP22-201ENST00000480755 780 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC034244.1-201ENST00000507687 207 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RNU6-202P-201ENST00000515998 96 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RNU6-885P-201ENST00000516607 104 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RN7SKP92-201ENST00000517266 244 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 RNA5SP179-201ENST00000517284 121 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AP000926.4-201ENST00000527351 454 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC090695.1-201ENST00000561269 1222 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC006960.3-201ENST00000561845 705 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC145350.1-201ENST00000567426 208 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC091488.1-201ENST00000604239 660 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC080013.3-201ENST00000606839 578 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 TUSC7.1-201ENST00000610969 165 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC091304.6-201ENST00000619761 202 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 AC138649.5-201ENST00000637456 137 ntBASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.63□□□□□ -1.83
NDE1Q9NXR1 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AF127577.6-201ENST00000623352 2191 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 HMGB1P5-201ENST00000255320 642 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 Y_RNA.192-201ENST00000363977 102 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RNA5SP366-201ENST00000365454 123 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RNU11-4P-201ENST00000391149 133 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RNU6-55P-201ENST00000411092 107 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RNU6-954P-201ENST00000411355 107 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC119751.6-201ENST00000416712 186 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RPL17P36-201ENST00000420302 549 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.62□□□□□ -1.83
NDE1Q9NXR1 RPL23AP15-201ENST00000450202 459 ntBASIC3.62□□□□□ -1.83
NDE1Q9NXR1 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms