Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC016550.3-201ENST00000515706 767 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 CR383656.14-201ENST00000551951 406 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 MIR5047-201ENST00000579212 100 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC093732.2-201ENST00000607950 274 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC107294.3-201ENST00000609211 526 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL391834.1-201ENST00000609609 560 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC105429.2-201ENST00000610567 517 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AC022509.4-201ENST00000621404 572 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL590240.3-201ENST00000621416 943 ntBASIC3.08□□□□□ -1.92
CISHQ9NSE2 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CISHQ9NSE2 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CISHQ9NSE2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 MTND5P19-201ENST00000424872 1794 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 SNORD65-201ENST00000391079 73 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 HMGB1P10-201ENST00000395823 563 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 UBA52P6-201ENST00000399822 382 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 HSPE1P26-201ENST00000405341 275 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 MTND4P11-201ENST00000417020 1058 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 RN7SKP82-201ENST00000516786 223 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 PDCL2P2-201ENST00000533651 189 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 AP004242.1-201ENST00000533701 349 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 LLPHP1-201ENST00000603571 367 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 AC091953.5-201ENST00000622919 233 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 AC009950.2-201ENST00000636548 183 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CISHQ9NSE2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 GTF2H2B-203ENST00000508065 1432 ntBASIC3.07□□□□□ -1.92
CISHQ9NSE2 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CISHQ9NSE2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CISHQ9NSE2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CISHQ9NSE2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CISHQ9NSE2 RAD1P1-201ENST00000231383 813 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CISHQ9NSE2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC069218.2-201ENST00000411665 344 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 UBE2V2P1-201ENST00000434717 398 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 RPS7P5-201ENST00000441482 581 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AL049830.2-201ENST00000480072 201 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC080014.1-201ENST00000496877 1201 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CISHQ9NSE2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AP003122.5-201ENST00000527668 3766 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 EIF4EP5-201ENST00000528228 640 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC055876.1-202ENST00000567053 138 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC083760.1-201ENST00000589621 670 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 IGHV3-29-201ENST00000604817 344 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AC005000.2-201ENST00000605468 310 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 RNA5SP108-201ENST00000605921 117 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 AL355816.1-201ENST00000607951 118 ntBASIC3.06□□□□□ -1.92
CISHQ9NSE2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.06□□□□□ -1.92
CISHQ9NSE2 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CISHQ9NSE2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 GNG5P1-201ENST00000255500 204 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL451074.5-201ENST00000415894 435 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL049610.1-201ENST00000423374 372 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.05□□□□□ -1.92
CISHQ9NSE2 AC006994.1-201ENST00000438212 839 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 AL592437.1-201ENST00000443781 492 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 RPL29P29-201ENST00000448725 423 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 NIPA2P5-201ENST00000452282 464 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 RPL37P3-201ENST00000456825 293 ntBASIC3.05□□□□□ -1.92
CISHQ9NSE2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms