Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC009117.1-201ENST00000563948 554 ntBASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 MIR3667-201ENST00000581025 74 ntBASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 TPMTP1-201ENST00000592307 737 ntBASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 AC022916.3-201ENST00000592961 742 ntBASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 CRYM-AS1-204ENST00000637983 556 ntBASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.61□□□□□ -1.67
TRIM54Q9BYV2 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RNU6-769P-201ENST00000384407 104 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RNU6-809P-201ENST00000384461 107 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 MIR195-201ENST00000385194 87 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RNA5SP372-201ENST00000390836 115 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ARL4AP5-201ENST00000404372 599 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 Y_RNA.598-201ENST00000410480 95 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 Y_RNA.619-201ENST00000410951 90 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 CYCSP10-201ENST00000417973 294 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL592293.2-201ENST00000422292 996 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL645608.4-201ENST00000423619 154 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL356583.2-201ENST00000426536 280 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 VN1R54P-201ENST00000435210 1049 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 GDI2P2-201ENST00000445131 608 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC079168.2-201ENST00000453977 416 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RN7SL817P-201ENST00000480777 288 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC109464.2-201ENST00000510242 943 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 PAICSP4-201ENST00000517543 1253 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AP003392.2-201ENST00000527269 208 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL139174.1-201ENST00000531489 886 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC022882.1-201ENST00000532142 501 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RN7SL652P-201ENST00000577769 300 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 MIR5697-201ENST00000578045 78 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 OR4G1P-201ENST00000588632 938 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 BNIP3P8-201ENST00000597863 560 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL512782.1-201ENST00000603093 364 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL390208.1-201ENST00000605885 644 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AC108479.2-201ENST00000617314 601 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 AL139089.1-201ENST00000620372 975 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 BMS1P21-201ENST00000634565 365 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 KPNA2P2-201ENST00000419546 1489 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ZNF734P-201ENST00000419494 1534 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 EOGT-210ENST00000615922 1931 ntBASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.6□□□□□ -1.67
TRIM54Q9BYV2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 AL161781.1-201ENST00000354277 403 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 RNY4P24-201ENST00000362735 96 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 RNU6-533P-201ENST00000384144 107 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 MIR1250-201ENST00000408098 113 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 RNA5SP113-201ENST00000410486 84 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 Y_RNA.599-201ENST00000410489 109 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 AL513174.1-201ENST00000423182 629 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 RPL7P57-201ENST00000423238 740 ntBASIC4.59□□□□□ -1.67
TRIM54Q9BYV2 RPS3AP44-201ENST00000425466 790 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms