Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC013404.1-201ENST00000413068 249 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MTCO1P52-201ENST00000433928 531 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC241584.1-201ENST00000438469 1241 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL353093.1-201ENST00000441292 436 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 TRIM60P18-201ENST00000441518 828 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RPS4XP4-201ENST00000443195 763 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 USP9YP29-201ENST00000445112 563 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 GAPDHP39-201ENST00000481866 979 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RPL37P25-201ENST00000507308 276 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 HSPE1P23-201ENST00000509838 286 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RFPL4AP5-201ENST00000514977 504 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MRPL49P2-201ENST00000521066 465 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 SMARCE1P4-201ENST00000523647 241 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC107918.3-201ENST00000533272 382 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC012435.1-202ENST00000568772 240 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC012417.1-201ENST00000582307 1039 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC011477.5-201ENST00000586571 259 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC011451.2-201ENST00000604303 598 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AP003973.1-201ENST00000604639 691 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 ARF4P1-201ENST00000605447 541 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AC017083.3-201ENST00000609955 700 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 MIR7844-201ENST00000616161 122 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 AL356266.1-201ENST00000623311 483 ntBASIC4.97□□□□□ -1.61
SALL3Q9BXA9 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SALL3Q9BXA9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
SALL3Q9BXA9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SALL3Q9BXA9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.96□□□□□ -1.61
SALL3Q9BXA9 AL353743.4-201ENST00000422653 1547 ntBASIC4.96□□□□□ -1.61
SALL3Q9BXA9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RNA5SP130-201ENST00000364431 114 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 Y_RNA.359-201ENST00000365498 102 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 SNORA75-201ENST00000384158 137 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RNY3P14-201ENST00000384309 102 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RNU6-253P-201ENST00000384730 105 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 MIR525-201ENST00000384978 85 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 SNORA3C-201ENST00000408792 125 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RNA5SP39-201ENST00000411245 120 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RNU6-575P-201ENST00000411326 105 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 TPMTP3-201ENST00000411928 735 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 HSPE1P12-201ENST00000412576 301 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 MRPS36P1-201ENST00000421291 307 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RPL7P44-201ENST00000424827 742 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AL592447.1-201ENST00000447592 540 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RPS11P1-201ENST00000451072 473 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 FGF7P6-202ENST00000451282 293 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 KATNBL1P6-201ENST00000453433 915 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RFC5P1-201ENST00000454419 874 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RPL7P24-201ENST00000493052 752 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC096751.1-202ENST00000502691 1067 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 RNU6-1004P-201ENST00000516584 111 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AL139174.1-201ENST00000531489 886 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC016957.1-201ENST00000534895 309 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 NIFKP8-201ENST00000560500 874 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 VN1R92P-201ENST00000598511 928 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 IPO5P1-202ENST00000600039 287 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AC126118.1-201ENST00000607744 628 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 AP005137.2-201ENST00000609238 400 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 MIR6867-201ENST00000610636 67 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 MIR6716-201ENST00000613413 80 ntBASIC4.96□□□□□ -1.62
SALL3Q9BXA9 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.96□□□□□ -1.62
SALL3Q9BXA9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SALL3Q9BXA9 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms