Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AL451062.2-201ENST00000427515 271 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 HIGD1AP4-201ENST00000430194 280 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 RPS6P15-201ENST00000431996 751 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.8□□□□□ -1.8
PKP2Q99959 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC106872.2-201ENST00000494303 480 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC025674.1-201ENST00000507074 324 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP2Q99959 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.8□□□□□ -1.8
PKP2Q99959 MTCO2P15-201ENST00000532655 656 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 AGGF1P6-201ENST00000569213 976 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP2Q99959 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.8□□□□□ -1.8
PKP2Q99959 AP001542.2-201ENST00000593141 364 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP2Q99959 VN1R78P-201ENST00000597393 564 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AC092106.3-201ENST00000611308 722 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AC024941.1-201ENST00000612250 334 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 MIR6716-201ENST00000613413 80 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 uc_338.13-201ENST00000618243 179 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AP005019.3-201ENST00000620418 560 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 AC079416.3-201ENST00000624479 549 ntBASIC3.8□□□□□ -1.8
PKP2Q99959 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP2Q99959 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP2Q99959 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
PKP2Q99959 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PKP2Q99959 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PKP2Q99959 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.8□□□□□ -1.8
PKP2Q99959 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP2Q99959 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP2Q99959 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 GABPAP-201ENST00000419271 1356 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP2Q99959 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PKP2Q99959 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP2Q99959 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
PKP2Q99959 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
PKP2Q99959 OR4K15-201ENST00000305051 1216 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PKP2Q99959 RNA5SP447-201ENST00000363749 119 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 RNU6-115P-201ENST00000364310 107 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.79□□□□□ -1.8
PKP2Q99959 MIR607-201ENST00000385241 96 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 MIR134-201ENST00000385258 73 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 RNU6-837P-201ENST00000391056 108 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP2Q99959 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 BTF3P8-201ENST00000414577 526 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 HMGB1P49-201ENST00000418882 569 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 RPL21P109-201ENST00000422213 475 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AL592293.2-201ENST00000422292 996 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AL513174.1-201ENST00000423182 629 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 C1DP1-201ENST00000426049 402 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 SETD6P1-201ENST00000444575 317 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 AL122001.1-201ENST00000457027 370 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC010618.1-201ENST00000469924 477 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 MTCO1P35-201ENST00000515270 228 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 MED28P5-201ENST00000528254 438 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP2Q99959 MTCYBP41-201ENST00000528913 1123 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP2Q99959 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC023050.2-201ENST00000544968 387 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC007224.1-201ENST00000564410 144 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC061975.8-201ENST00000587058 721 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.79□□□□□ -1.8
PKP2Q99959 AC025588.3-201ENST00000604182 274 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP2Q99959 AL451044.1-201ENST00000604867 238 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AC110741.2-201ENST00000605278 268 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 BRDTP1-201ENST00000605735 677 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.79□□□□□ -1.8
PKP2Q99959 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AP002782.1-201ENST00000623107 614 ntBASIC3.79□□□□□ -1.8
PKP2Q99959 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms