Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC015688.2-201ENST00000584523 262 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 MIR3138-201ENST00000585238 82 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.54□□□□□ -1.84
SSX3Q99909 AC022146.1-201ENST00000595307 847 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC079587.1-201ENST00000603846 277 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AL035411.2-201ENST00000604022 421 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AL590392.1-201ENST00000604960 446 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC010201.1-201ENST00000605051 540 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC128687.1-201ENST00000605304 619 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC012603.1-201ENST00000606424 528 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC090912.3-201ENST00000609775 533 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 AC005332.6-201ENST00000613178 446 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 CR381572.1-201ENST00000625098 102 ntBASIC3.54□□□□□ -1.84
SSX3Q99909 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.54□□□□□ -1.84
SSX3Q99909 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SSX3Q99909 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SSX3Q99909 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX3Q99909 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX3Q99909 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 NACA3P-201ENST00000359690 648 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 Y_RNA.25-201ENST00000362528 102 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RNA5SP388-201ENST00000362584 119 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 DEFB109C-201ENST00000382575 264 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 DEFB109B-201ENST00000382656 264 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RNU6-657P-201ENST00000383904 107 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RNU6-413P-201ENST00000384115 107 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RNU6-821P-201ENST00000390995 107 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 SNORA74C-2-201ENST00000411179 201 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AL161449.1-201ENST00000414531 1199 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RPS23P10-201ENST00000416185 486 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 MTCO3P12-201ENST00000416718 547 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 MTND2P9-201ENST00000422293 931 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AL049610.1-201ENST00000423374 372 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC092648.1-201ENST00000425870 423 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RSL24D1P6-201ENST00000426934 401 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC092017.2-201ENST00000427600 362 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 USP9YP24-201ENST00000434374 697 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 UBE2V1P3-201ENST00000439651 417 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RPL21P133-201ENST00000443666 476 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 USP9YP17-201ENST00000444617 696 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 NUTF2P3-201ENST00000448540 384 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 DDX39BP2-208ENST00000453923 258 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC092155.2-201ENST00000454675 477 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC092754.2-201ENST00000463506 460 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RN7SL330P-201ENST00000469709 307 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.53□□□□□ -1.84
SSX3Q99909 RNU6-1261P-201ENST00000517194 104 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 HIGD1AP10-201ENST00000527837 282 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 PHBP17-201ENST00000528576 541 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 OR4A12P-201ENST00000530847 918 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC008127.2-201ENST00000549925 1075 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 TRAV15-201ENST00000556680 249 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX3Q99909 AL049838.1-201ENST00000563647 981 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC087481.2-201ENST00000565492 330 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC136624.4-201ENST00000573044 370 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.53□□□□□ -1.84
SSX3Q99909 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC3.53□□□□□ -1.84
SSX3Q99909 AL592436.1-201ENST00000605135 558 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC231759.1-201ENST00000616455 597 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC018755.4-201ENST00000619715 454 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC040168.1-201ENST00000623594 991 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 AC008785.1-201ENST00000624475 456 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.53□□□□□ -1.84
SSX3Q99909 AC140479.6-201ENST00000633535 357 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SSX3Q99909 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSX3Q99909 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
SSX3Q99909 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.53□□□□□ -1.85
SSX3Q99909 AL672296.1-201ENST00000427780 2158 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.52□□□□□ -1.85
SSX3Q99909 PRO1804-201ENST00000623780 2050 ntBASIC3.52□□□□□ -1.85
SSX3Q99909 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX3Q99909 RNU6-50P-201ENST00000362356 103 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms