Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC092745.2-202ENST00000411880 369 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL592310.1-201ENST00000414330 671 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 TAF13P2-201ENST00000416876 286 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 OR1AA1P-201ENST00000419597 916 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC048351.1-201ENST00000420064 602 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL513174.1-201ENST00000423182 629 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC005019.1-201ENST00000436455 431 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 BTF3P5-201ENST00000457252 467 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 TRBV8-2-201ENST00000475637 270 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 UBE2NP1-201ENST00000545592 458 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL450336.1-201ENST00000605180 586 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL034351.1-201ENST00000605288 668 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL356321.1-201ENST00000621360 228 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AC058791.1-201ENST00000608412 3198 ntBASIC4.8□□□□□ -1.64
SIN3AQ96ST3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SIN3AQ96ST3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AL357075.1-201ENST00000404107 726 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 RNA5SP229-201ENST00000410809 99 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 RPS7P9-201ENST00000414704 586 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 MTND4P3-201ENST00000417829 541 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 BX679664.1-201ENST00000434429 253 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC022431.1-201ENST00000450941 438 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 WBP1LP4-201ENST00000505043 344 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 Y_RNA.717-201ENST00000517106 92 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC107934.2-201ENST00000518653 310 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 OR8K4P-201ENST00000534608 872 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC092851.1-201ENST00000535964 478 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC006557.5-201ENST00000603126 811 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AL365503.1-201ENST00000605247 905 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 RMST_8.1-201ENST00000610287 165 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 RNVU1-4-201ENST00000612985 164 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 MIR8058-201ENST00000615737 89 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 MIR7112-201ENST00000616126 65 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 AC109809.1-201ENST00000619665 545 ntBASIC4.79□□□□□ -1.64
SIN3AQ96ST3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SIN3AQ96ST3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 MIR1303-201ENST00000408625 86 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 RNU6-55P-201ENST00000411092 107 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 RNU6-954P-201ENST00000411355 107 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 RPS7P15-201ENST00000415804 584 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC092648.1-201ENST00000425870 423 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AL451062.2-201ENST00000427515 271 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 RPL7P28-201ENST00000437739 740 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC005002.1-201ENST00000447458 540 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 DNAJC19P8-201ENST00000452887 259 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC010401.1-201ENST00000463867 348 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC134050.1-201ENST00000495088 933 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC023050.1-201ENST00000498198 304 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 HMGB1P1-201ENST00000522557 636 ntBASIC4.78□□□□□ -1.64
SIN3AQ96ST3 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.78□□□□□ -1.64
SIN3AQ96ST3 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms