Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.7□□□□□ -1.82
PTP4A1Q93096 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTP4A1Q93096 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTP4A1Q93096 U1.1-201ENST00000384101 164 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 SNRPEP2-201ENST00000397592 279 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 SNORA11B-201ENST00000408175 129 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 RNU2-42P-201ENST00000410697 113 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 RPL21P32-201ENST00000419877 477 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 GTF2IP23-201ENST00000423746 351 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC012497.1-201ENST00000429392 575 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 SLC31A1P1-201ENST00000451221 567 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 OFD1P3Y-201ENST00000453312 783 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 USP9YP34-201ENST00000453983 808 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 SUMO2P2-201ENST00000456482 255 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AL136097.1-201ENST00000456945 913 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 RN7SL303P-201ENST00000469773 251 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 RNU6-1095P-201ENST00000516148 108 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 RNU7-143P-201ENST00000516781 65 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 PSMB7P1-201ENST00000556349 514 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTP4A1Q93096 BNIP3P27-201ENST00000599991 412 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AL451044.1-201ENST00000604867 238 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AL390240.1-201ENST00000612950 384 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 MIR8058-201ENST00000615737 89 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC090246.1-201ENST00000616499 426 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC015967.1-201ENST00000619893 476 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC104985.3-201ENST00000623479 597 ntBASIC3.69□□□□□ -1.82
PTP4A1Q93096 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTP4A1Q93096 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
PTP4A1Q93096 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PTP4A1Q93096 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PTP4A1Q93096 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 RPL7P26-201ENST00000333817 754 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 RNA5SP509-201ENST00000364577 119 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AL355143.1-201ENST00000407101 841 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC092447.6-201ENST00000414578 210 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC019178.2-201ENST00000423595 505 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 PSMA6P3-201ENST00000428242 164 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 MTCYBP34-201ENST00000439552 670 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 CBX1P1-201ENST00000440184 427 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 RPL39P6-201ENST00000448289 150 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 RPL35P6-201ENST00000490024 372 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC093752.1-206ENST00000511823 336 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 SNORA31.8-201ENST00000516327 108 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 RNU6-1225P-201ENST00000516336 65 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 RAB9BP1-201ENST00000519581 626 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 HIGD1AP10-201ENST00000527837 282 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PTP4A1Q93096 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC012417.1-201ENST00000582307 1039 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC069366.1-201ENST00000583159 838 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.68□□□□□ -1.82
PTP4A1Q93096 AC004987.4-201ENST00000603383 338 ntBASIC3.68□□□□□ -1.82
PTP4A1Q93096 AL391497.1-201ENST00000608671 547 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms