Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOPBP1Q92547 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOPBP1Q92547 RNVU1-3-201ENST00000364313 161 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TOPBP1Q92547 RPL31P1-201ENST00000398116 372 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 LAP3P1-201ENST00000403648 294 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 RNU4-26P-201ENST00000410270 107 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 AC108210.2-201ENST00000503681 201 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 SEC11B-201ENST00000518383 499 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 ZNF861P-201ENST00000588126 639 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TOPBP1Q92547 AL158196.1-201ENST00000616786 434 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 AC103798.2-201ENST00000624292 632 ntBASIC4.45□□□□□ -1.7
TOPBP1Q92547 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
TOPBP1Q92547 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TOPBP1Q92547 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 AC245054.2-201ENST00000415639 319 ntBASIC4.44□□□□□ -1.7
TOPBP1Q92547 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.44□□□□□ -1.7
TOPBP1Q92547 RMST_9.1-201ENST00000619945 193 ntBASIC4.44□□□□□ -1.7
TOPBP1Q92547 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TOPBP1Q92547 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TOPBP1Q92547 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.43□□□□□ -1.7
TOPBP1Q92547 RNU6-482P-201ENST00000391068 107 ntBASIC4.43□□□□□ -1.7
TOPBP1Q92547 AL079342.1-201ENST00000401460 267 ntBASIC4.43□□□□□ -1.7
TOPBP1Q92547 YPEL5P1-201ENST00000419731 367 ntBASIC4.43□□□□□ -1.7
TOPBP1Q92547 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.43□□□□□ -1.7
TOPBP1Q92547 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.43□□□□□ -1.7
TOPBP1Q92547 AL122125.1-201ENST00000616999 600 ntBASIC4.43□□□□□ -1.7
TOPBP1Q92547 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TOPBP1Q92547 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.42□□□□□ -1.7
TOPBP1Q92547 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOPBP1Q92547 RNU4-44P-201ENST00000363050 141 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 CYCSP45-201ENST00000402289 315 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 RPS7P13-201ENST00000413955 498 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 AC127526.1-201ENST00000417526 366 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 RPS6P2-201ENST00000454208 705 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 OR6K1P-201ENST00000456766 971 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 HPRT1P3-201ENST00000539521 576 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 AL391156.1-201ENST00000554965 554 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 AC009977.1-201ENST00000586015 570 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 AC010338.1-201ENST00000621823 717 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 AC073869.7-201ENST00000640874 297 ntBASIC4.42□□□□□ -1.7
TOPBP1Q92547 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TOPBP1Q92547 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOPBP1Q92547 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TOPBP1Q92547 AL135786.1-201ENST00000415892 214 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 AL356320.1-201ENST00000429616 163 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 FAM103A2P-201ENST00000444122 354 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC006539.3-201ENST00000454258 129 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC113430.1-201ENST00000506872 718 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC005921.1-201ENST00000510589 286 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 AL451049.1-201ENST00000608672 497 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC099063.3-201ENST00000642066 185 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 MTCO1P22-201ENST00000604619 1360 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC092881.1-201ENST00000638218 2733 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TOPBP1Q92547 UQCRHP3-201ENST00000451503 251 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 RPL9P32-201ENST00000464118 620 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC009163.5-201ENST00000575421 637 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC009159.1-201ENST00000618386 642 ntBASIC4.41□□□□□ -1.7
TOPBP1Q92547 AC116158.1-201ENST00000560231 2129 ntBASIC4.4□□□□□ -1.7
TOPBP1Q92547 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TOPBP1Q92547 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TOPBP1Q92547 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
TOPBP1Q92547 OR4G1P-202ENST00000641173 1788 ntBASIC4.4□□□□□ -1.7
TOPBP1Q92547 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 RNU6ATAC15P-201ENST00000408279 121 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 RNA5SP247-201ENST00000411181 105 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 RPS12P23-201ENST00000419579 400 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 FCF1P1-201ENST00000432690 571 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 GAPDHP39-201ENST00000481866 979 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 SNORA64.4-201ENST00000516632 81 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 AC015712.3-201ENST00000559380 164 ntBASIC4.4□□□□□ -1.71
TOPBP1Q92547 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.4□□□□□ -1.71
TOPBP1Q92547 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
TOPBP1Q92547 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
TOPBP1Q92547 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOPBP1Q92547 AC008264.2-201ENST00000610193 3731 ntBASIC4.39□□□□□ -1.71
TOPBP1Q92547 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
TOPBP1Q92547 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
TOPBP1Q92547 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.39□□□□□ -1.71
TOPBP1Q92547 MIR27B-201ENST00000385129 97 ntBASIC4.39□□□□□ -1.71
TOPBP1Q92547 AC105402.2-201ENST00000438503 358 ntBASIC4.39□□□□□ -1.71
TOPBP1Q92547 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.39□□□□□ -1.71
TOPBP1Q92547 RPL21P41-201ENST00000459863 264 ntBASIC4.39□□□□□ -1.71
TOPBP1Q92547 RPS26P24-201ENST00000497656 331 ntBASIC4.39□□□□□ -1.71
TOPBP1Q92547 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms