Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL049693.1-201ENST00000402760 611 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 MTND2P18-201ENST00000419962 1030 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 MTCO3P1-205ENST00000422088 832 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 COX6B1P7-201ENST00000430845 235 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 BTF3P10-201ENST00000433415 495 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 MTND1P16-201ENST00000465177 898 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 MTND1P22-201ENST00000510572 951 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC118465.1-201ENST00000513820 1271 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AP000790.1-201ENST00000528891 737 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC091515.1-201ENST00000548110 679 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 PARP1P2-201ENST00000556806 195 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC074051.3-201ENST00000570238 358 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 MIR4644-201ENST00000579929 84 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC008088.1-201ENST00000580993 280 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 KPNA2P3-201ENST00000584190 848 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AL133507.1-201ENST00000605269 557 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC103706.2-201ENST00000638080 240 ntBASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A1Q8WWI5 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.03□□□□□ -1.77
SLC44A1Q8WWI5 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 OR4A15-201ENST00000314706 1035 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 SNORA60-201ENST00000362396 134 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 RNU6-931P-201ENST00000363850 107 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC068533.2-201ENST00000411872 306 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC092017.2-201ENST00000427600 362 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AL606662.1-201ENST00000445763 553 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 RSL24D1P3-201ENST00000449255 495 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AL133217.1-201ENST00000450980 425 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AL109741.2-201ENST00000455561 343 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 RN7SL93P-201ENST00000463035 293 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC041039.1-201ENST00000485656 536 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC021146.8-201ENST00000507455 733 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC092851.1-201ENST00000535964 478 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC109446.2-201ENST00000567872 497 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AL590392.1-201ENST00000604960 446 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC091946.2-201ENST00000606105 291 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC005962.2-201ENST00000611427 652 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC006338.2-201ENST00000616864 791 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC120349.2-201ENST00000625002 298 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 AC011978.2-201ENST00000569835 2054 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 MTND4P34-201ENST00000572715 1371 ntBASIC4.02□□□□□ -1.77
SLC44A1Q8WWI5 LINC00561-201ENST00000565815 2738 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 OR11H4-201ENST00000315409 1082 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 Y_RNA.25-201ENST00000362528 102 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RNU1-18P-201ENST00000363062 164 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 RNU6-921P-201ENST00000384361 107 ntBASIC4.01□□□□□ -1.77
SLC44A1Q8WWI5 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 278.3 ms