Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 AC092070.2-203ENST00000598377 3644 ntBASIC9.34□□□□□ -0.91
TRIM41Q8WV44 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TRIM41Q8WV44 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.92
TRIM41Q8WV44 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AL022323.4-201ENST00000623980 13120 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 RNU6-251P-201ENST00000363235 104 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 RNU6-952P-201ENST00000391164 108 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 RNU6-847P-201ENST00000411115 108 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 COX6B1P1-201ENST00000415962 213 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC114482.1-201ENST00000418010 247 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC234779.1-201ENST00000425910 285 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 snoU13.1-201ENST00000459157 104 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 RN7SL283P-201ENST00000489055 303 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC083829.1-201ENST00000503756 657 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AL161670.1-201ENST00000554348 137 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC098848.2-201ENST00000588023 330 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC018809.2-201ENST00000602436 3823 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC113194.1-201ENST00000606037 500 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC018690.1-201ENST00000608144 626 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 RMST_9.1-201ENST00000619945 193 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC091953.2-201ENST00000623979 160 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 AC104964.3-201ENST00000606115 2860 ntBASIC9.33□□□□□ -0.92
TRIM41Q8WV44 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC9.33□□□□□ -0.92
TRIM41Q8WV44 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 ZNF652P1-201ENST00000442420 1309 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 RBPJP2-201ENST00000618187 1444 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 Y_RNA.187-201ENST00000363918 113 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 U3.23-201ENST00000391132 200 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AL592114.1-201ENST00000403842 483 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 CHIAP3-201ENST00000423668 1133 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AC005517.2-201ENST00000424673 553 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 RPS3AP52-201ENST00000435639 297 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 SUMO1P3-201ENST00000439961 304 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 RNU7-152P-201ENST00000458982 64 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 U8.20-201ENST00000459445 131 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 RPS17P5-201ENST00000498293 408 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AC004980.4-201ENST00000513375 203 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 RN7SKP67-201ENST00000515905 235 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AC022884.3-201ENST00000579571 248 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 MIR3118-1-201ENST00000581787 76 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 BBIP1P1-201ENST00000602999 279 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AL138960.1-201ENST00000613838 513 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 ELL2P4-201ENST00000446870 1376 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 THUMPD3P1-201ENST00000506556 1480 ntBASIC9.32□□□□□ -0.92
TRIM41Q8WV44 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
TRIM41Q8WV44 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 PARD3-204ENST00000374768 799 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AL590290.1-201ENST00000405336 380 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 RNU6-370P-201ENST00000411008 104 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC9.31□□□□□ -0.92
TRIM41Q8WV44 ATP5LP5-201ENST00000483050 299 ntBASIC9.31□□□□□ -0.92
TRIM41Q8WV44 GAPDHP62-201ENST00000515313 990 ntBASIC9.31□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 266.5 ms