Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 AF246928.1-201ENST00000623768 87 ntBASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 AC117529.2-201ENST00000512159 2068 ntBASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.42□□□□□ -1.7
SCN4BQ8IWT1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC011978.2-201ENST00000569835 2054 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC067945.1-201ENST00000342609 618 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 MIR124-3-201ENST00000384866 87 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 SNORA57.1-201ENST00000391227 145 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RPL23AP29-201ENST00000397284 453 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 ZNF603P-201ENST00000405613 487 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 MIR1179-201ENST00000408703 91 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AL356095.1-201ENST00000417217 199 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RBMY1KP-201ENST00000423480 476 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 MTND4P32-201ENST00000437189 1237 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 HSFY6P-201ENST00000445573 403 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 BX276092.4-201ENST00000452056 248 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 MTCO3P2-201ENST00000457365 171 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RPL7P1-201ENST00000468161 747 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RPL7P9-201ENST00000468715 747 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RPL21P103-201ENST00000479921 488 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RN7SL604P-201ENST00000492589 296 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC108145.1-201ENST00000503770 153 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AL389895.1-201ENST00000554127 252 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC007954.1-201ENST00000554198 494 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AGGF1P8-201ENST00000562979 1000 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC004987.4-201ENST00000603383 338 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 LLPHP1-201ENST00000603571 367 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC105129.3-201ENST00000605455 485 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 RNU4-89P-201ENST00000607443 133 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC024941.1-201ENST00000612250 334 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC009090.3-201ENST00000616553 565 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AL136964.1-201ENST00000622038 2990 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC091931.1-201ENST00000623488 728 ntBASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SCN4BQ8IWT1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SCN4BQ8IWT1 OR11H4-201ENST00000315409 1082 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 SNRPEP3-201ENST00000338402 276 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 RNU1-15P-201ENST00000353977 144 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 Y_RNA.18-201ENST00000362461 102 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 Y_RNA.126-201ENST00000363382 111 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 RNA5SP283-201ENST00000365604 119 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 SNORA70E-201ENST00000384492 135 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 RPL21P65-201ENST00000406094 466 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AC073264.1-201ENST00000411508 416 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 PIGPP2-201ENST00000411569 458 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 RPS15AP38-201ENST00000413110 372 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AL035407.1-201ENST00000429211 571 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 PSMA2P3-201ENST00000429685 675 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AL117339.2-201ENST00000430475 180 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 RPL23AP16-201ENST00000441715 421 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 AL162151.2-201ENST00000448875 158 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 RPL26P28-201ENST00000451325 435 ntBASIC4.4□□□□□ -1.71
SCN4BQ8IWT1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 277.2 ms