Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 RPL21P47-201ENST00000483696 477 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 RPS27P23-201ENST00000487608 251 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 OR5H3P-201ENST00000502817 919 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 PTGES3P3-201ENST00000511479 482 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC092593.2-201ENST00000513866 913 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 HIGD1AP3-201ENST00000515857 278 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 RNU6-202P-201ENST00000515998 96 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 RNU1-45P-201ENST00000517191 141 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC106785.1-201ENST00000565935 262 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 RN7SL622P-201ENST00000585292 275 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC020914.6-201ENST00000594327 272 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 MIR7851-201ENST00000610611 160 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AC020923.1-201ENST00000624021 917 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 AL645937.1-201ENST00000641739 1652 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 MAPK10-362ENST00000641864 4484 ntBASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC50Q8IVM0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 BTBD10P2-201ENST00000404779 676 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 RSL24D1P1-201ENST00000404972 493 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 MTCO1P43-201ENST00000431831 488 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 NEK4P1-201ENST00000433383 879 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC244505.4-201ENST00000434905 287 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 SSXP5-201ENST00000443473 287 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC005002.1-201ENST00000447458 540 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC073387.1-201ENST00000453261 709 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 U3.44-201ENST00000458938 192 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC025518.1-201ENST00000479856 347 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 MTND3P24-201ENST00000506306 329 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC104108.1-201ENST00000509930 412 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 SERPINE4P-201ENST00000554978 281 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC067852.3-201ENST00000589177 561 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC006557.5-201ENST00000603126 811 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC005776.1-201ENST00000603164 290 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AL512506.1-201ENST00000613918 449 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AL731566.2-201ENST00000618971 317 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 AC132825.7-201ENST00000638744 335 ntBASIC3.56□□□□□ -1.84
CCDC50Q8IVM0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 RNA5SP197-201ENST00000363357 119 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 DSTNP4-201ENST00000399472 474 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 RN7SKP123-201ENST00000410732 291 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 RNU6-272P-201ENST00000411028 104 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC008173.1-201ENST00000418901 264 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 PAICSP7-201ENST00000419829 962 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC241520.1-201ENST00000422654 1099 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AL513175.1-201ENST00000431492 780 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 RPL17P35-201ENST00000432217 549 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 CKS1BP5-201ENST00000434172 273 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 RPL7P55-201ENST00000450522 746 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC005921.1-201ENST00000510589 286 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 OR8L1P-201ENST00000534005 955 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 BNIP3P4-201ENST00000604946 565 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 RNA5SP108-201ENST00000605921 117 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 HMGN2P28-201ENST00000606102 262 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC048347.1-201ENST00000624621 427 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AL109659.3-201ENST00000624985 950 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC073476.4-201ENST00000628409 72 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC017071.1-201ENST00000564407 2204 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 AC024341.1-201ENST00000526444 1552 ntBASIC3.55□□□□□ -1.84
CCDC50Q8IVM0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC50Q8IVM0 ELL2P4-201ENST00000446870 1376 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms