Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VRK3Q8IV63 RBPJP2-201ENST00000618187 1444 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 AL731566.1-201ENST00000620490 1937 ntBASIC4.62□□□□□ -1.67
VRK3Q8IV63 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.62□□□□□ -1.67
VRK3Q8IV63 SDAD1P1-202ENST00000524156 2051 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL672167.1-203ENST00000641299 2975 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL590240.1-201ENST00000334118 313 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 RNU6-877P-201ENST00000383868 107 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 RNU6-483P-201ENST00000384088 108 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 Y_RNA.529-201ENST00000384586 119 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL591848.1-201ENST00000413092 322 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 RPS3AP9-201ENST00000417027 792 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 BX510359.2-201ENST00000417920 305 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 ZNF90P2-204ENST00000419323 1075 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC083875.1-201ENST00000419509 405 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AF228730.4-201ENST00000421457 183 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 RPL36AP10-201ENST00000421785 322 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL158073.1-201ENST00000426848 1104 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 RPS27P18-201ENST00000431701 247 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL049745.1-201ENST00000433953 286 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 RPS27AP15-201ENST00000447672 466 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AL645937.3-201ENST00000453647 936 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 RAD23BP3-201ENST00000454157 1152 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 OR6K1P-201ENST00000456766 971 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC105914.1-201ENST00000511798 226 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 RNU6-583P-201ENST00000516012 92 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 ARL2BPP2-201ENST00000550907 489 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC141257.3-201ENST00000572906 215 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 SNORD39.2-201ENST00000579995 76 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC023509.5-201ENST00000617434 807 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 AC026634.1-201ENST00000634369 198 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 ATE1-AS1-202ENST00000636460 506 ntBASIC4.61□□□□□ -1.67
VRK3Q8IV63 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
VRK3Q8IV63 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
VRK3Q8IV63 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 Y_RNA.25-201ENST00000362528 102 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 RNU1-83P-201ENST00000363426 164 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 Y_RNA.162-201ENST00000363683 102 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 SNORA62.2-201ENST00000364672 152 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 Y_RNA.356-201ENST00000365475 113 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 RNU6-1227P-201ENST00000383981 107 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 RNU6-878P-201ENST00000384578 110 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 Y_RNA.548-201ENST00000384656 105 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 MIR506-201ENST00000384998 124 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 MIR320B1-201ENST00000390209 79 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 SNRPEP2-201ENST00000397592 279 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VRK3Q8IV63 FAT1P1-201ENST00000406588 507 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 Y_RNA.608-201ENST00000410647 95 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC007390.1-201ENST00000415722 356 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 BTF3L4P3-201ENST00000418879 476 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AL358934.1-201ENST00000432346 324 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 KCTD9P3-201ENST00000434597 1169 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 UBE2V1P5-201ENST00000440070 405 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 Z80107.2-201ENST00000445127 392 ntBASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.6□□□□□ -1.67
VRK3Q8IV63 AC231760.1-201ENST00000498002 260 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms