Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AL356489.2-201ENST00000566968 3528 ntBASIC4.57□□□□□ -1.68
RNF220Q5VTB9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
RNF220Q5VTB9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC092104.1-201ENST00000497346 1441 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 MIR223-201ENST00000385204 110 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RPS3AP23-201ENST00000401762 784 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 U3.35-201ENST00000408405 208 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 Y_RNA.598-201ENST00000410480 95 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 CDK8P2-201ENST00000415020 547 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AL356583.2-201ENST00000426536 280 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 OR2B7P-201ENST00000429302 934 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AL589823.1-201ENST00000429577 183 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 DLGAP5P1-201ENST00000430307 464 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC092162.1-201ENST00000432828 434 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 CNOT7P2-201ENST00000441051 832 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RPL34P20-201ENST00000442771 351 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 PDSS1P2-201ENST00000449397 678 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 SBDSP1-204ENST00000453858 737 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RPL5P32-201ENST00000454085 879 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC093270.2-201ENST00000486157 792 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RN7SL30P-201ENST00000488416 306 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC012170.1-201ENST00000495139 359 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC072052.1-201ENST00000496556 306 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC112204.1-201ENST00000502591 103 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 ARL2BPP4-201ENST00000506854 471 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 PPBPP1-201ENST00000510807 373 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RNA5SP43-201ENST00000516559 110 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RNU6-1003P-201ENST00000517099 105 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 DEFB109D-201ENST00000529497 240 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC022832.1-201ENST00000530718 645 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 OR10G5P-201ENST00000532733 358 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 TVP23CP2-201ENST00000571473 623 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC012213.3-201ENST00000577199 777 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC068790.5-201ENST00000602741 355 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC011816.2-201ENST00000607089 556 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AP000254.1-201ENST00000609934 520 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC009509.4-201ENST00000619202 509 ntBASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF220Q5VTB9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 SNORD74.4-201ENST00000364129 80 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 Z97832.1-201ENST00000402490 328 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AL138880.1-201ENST00000405824 642 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 RN7SKP216-201ENST00000411050 312 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 VDAC1P9-201ENST00000412766 841 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 MTCO3P41-201ENST00000414801 328 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 OR2AM1P-201ENST00000422137 422 ntBASIC4.55□□□□□ -1.68
RNF220Q5VTB9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RNF220Q5VTB9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms