Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC100770.1-201ENST00000532310 322 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 OR7K1P-201ENST00000546439 926 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 CR383656.6-201ENST00000550518 394 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC012182.1-201ENST00000570133 895 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 VN1R90P-201ENST00000595717 726 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC008745.1-201ENST00000604064 271 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC113403.1-201ENST00000604910 193 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AL390208.1-201ENST00000605885 644 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC024560.3-201ENST00000608482 349 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 uc_338.13-201ENST00000618243 179 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC018755.4-201ENST00000619715 454 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC018816.2-201ENST00000621460 353 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AL445264.1-201ENST00000621719 171 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 C2orf27A-204ENST00000623058 969 ntBASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRICKLE4Q2TBC4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC244517.1-201ENST00000606030 2086 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AL133412.1-201ENST00000380194 2992 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RNA5SP447-201ENST00000363749 119 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RN7SKP177-201ENST00000410567 355 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 MIR1911-201ENST00000410783 80 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RPL21P108-201ENST00000413857 481 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC068287.1-201ENST00000430283 295 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC011998.1-201ENST00000433403 117 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AL132765.1-201ENST00000434165 553 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AL121871.1-201ENST00000443413 436 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC002381.1-201ENST00000447049 280 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 ARPC3P2-201ENST00000457786 533 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RN7SL98P-201ENST00000462271 300 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RPL31P50-201ENST00000471002 296 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC013356.1-201ENST00000489027 564 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 RN7SL810P-201ENST00000493031 276 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC023141.12-201ENST00000512399 199 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC119751.5-201ENST00000514077 770 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 MIR4700-201ENST00000578311 74 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 MIR5096-201ENST00000583713 70 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC068790.4-201ENST00000602474 263 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC018714.1-201ENST00000605028 208 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC099063.3-201ENST00000642066 185 ntBASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRICKLE4Q2TBC4 AC139713.2-214ENST00000642059 1811 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms