Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 OR5AP1P-201ENST00000529730 940 ntBASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 VN1R92P-201ENST00000598511 928 ntBASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 AP000720.1-201ENST00000625091 483 ntBASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SHROOM1Q2M3G4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC091152.2-201ENST00000591628 2569 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 RNA5SP27-201ENST00000363839 119 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 HMGN2P8-201ENST00000391458 268 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL357075.1-201ENST00000404107 726 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL355379.1-201ENST00000405542 640 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL590399.6-201ENST00000446396 307 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 TRBV8-2-201ENST00000475637 270 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 RPL7P38-201ENST00000488396 739 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 RN7SKP96-201ENST00000516948 297 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AP000916.1-201ENST00000533869 835 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 MTND4LP25-201ENST00000570218 163 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 MTCO1P18-201ENST00000455518 1419 ntBASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM1Q2M3G4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 MIR423-201ENST00000362201 94 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RNU6-543P-201ENST00000362576 108 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 HMGB3P31-201ENST00000413333 595 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 OR4K6P-201ENST00000416478 897 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RPL7P44-201ENST00000424827 742 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 MOB1AP2-201ENST00000446060 614 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 BX276092.4-201ENST00000452056 248 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RPL32P14-201ENST00000463196 378 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RN7SL594P-201ENST00000470590 287 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RPL7P23-201ENST00000493874 747 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RN7SKP83-201ENST00000516512 178 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 SCARNA13-201ENST00000516672 275 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RN7SKP277-201ENST00000516895 283 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC092451.2-201ENST00000538746 658 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC092747.2-201ENST00000545069 983 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC090312.2-201ENST00000582687 378 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 MIR4276-201ENST00000584832 70 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AL162713.1-201ENST00000604480 262 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC073569.3-201ENST00000619055 682 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC092628.2-201ENST00000622492 339 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 AC026422.1-201ENST00000623961 452 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 OR6C71P-202ENST00000641886 1107 ntBASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHROOM1Q2M3G4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 SEPT7P7-201ENST00000420492 1301 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 AC008432.1-201ENST00000615912 1320 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 RNU6-609P-201ENST00000365459 107 ntBASIC4□□□□□ -1.77
SHROOM1Q2M3G4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHROOM1Q2M3G4 BX664727.1-201ENST00000416024 466 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms