Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 CYCSP39-201ENST00000565821 309 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AL390838.2-201ENST00000602394 274 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 ABI1P1-201ENST00000603375 1120 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 ATP1B3P1-201ENST00000605365 821 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 AC010338.1-201ENST00000621823 717 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 MTND5P19-201ENST00000424872 1794 ntBASIC3.54□□□□□ -1.84
RFX7Q2KHR2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.54□□□□□ -1.84
RFX7Q2KHR2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 SNORA48.8-201ENST00000391324 134 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AL645937.1-202ENST00000421799 937 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AL845331.3-202ENST00000562856 261 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 MTND2P13-201ENST00000577438 1039 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC007566.2-201ENST00000603642 413 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC107294.3-201ENST00000609211 526 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 ZNF826P-207ENST00000622273 1910 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 AC025125.1-201ENST00000624743 1922 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.53□□□□□ -1.84
RFX7Q2KHR2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RFX7Q2KHR2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.53□□□□□ -1.85
RFX7Q2KHR2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 RNA5SP80-201ENST00000410475 111 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 AP004217.1-201ENST00000480579 346 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 AC012170.1-201ENST00000495139 359 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 AC117522.3-201ENST00000507974 584 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 AC079600.2-201ENST00000550076 130 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 AC024153.1-201ENST00000603103 365 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 OR2AS2P-201ENST00000606902 342 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.52□□□□□ -1.85
RFX7Q2KHR2 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RFX7Q2KHR2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 RPL7P59-201ENST00000447700 943 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL162389.1-201ENST00000449233 177 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 TVP23BP2-201ENST00000455082 615 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 RPL23AP44-201ENST00000482216 473 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL121839.1-201ENST00000556233 1185 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 MIR4319-201ENST00000577285 85 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL096803.3-201ENST00000609032 532 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 Z99129.2-201ENST00000619967 314 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL451074.5-201ENST00000415894 435 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL139281.1-201ENST00000422120 335 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 NUP35P1-201ENST00000422734 947 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC022022.1-201ENST00000430304 178 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 VDAC1P3-201ENST00000434069 851 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 NPM1P35-201ENST00000533043 868 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC025260.1-201ENST00000548858 430 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 MIR4458-201ENST00000578872 75 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AC007423.1-201ENST00000605009 627 ntBASIC3.51□□□□□ -1.85
RFX7Q2KHR2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.51□□□□□ -1.85
RFX7Q2KHR2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RFX7Q2KHR2 RNA5SP167-201ENST00000365461 116 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms