Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 IGKV2D-23-201ENST00000518179 286 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC018630.1-201ENST00000541376 925 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 RN7SL339P-201ENST00000580597 296 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 Mico1.1-201ENST00000611698 204 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AL049539.1-201ENST00000611964 459 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AC107075.1-201ENST00000613695 314 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 U7.8-201ENST00000619968 63 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 AL353748.2-201ENST00000622148 471 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AC125257.1-201ENST00000560400 2930 ntBASIC3.69□□□□□ -1.82
SCN1BQ07699 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SCN1BQ07699 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SCN1BQ07699 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.69□□□□□ -1.82
SCN1BQ07699 AL672296.1-201ENST00000427780 2158 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 RNA5SP175-201ENST00000364275 119 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 SNORD6-201ENST00000365444 73 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 SNORD116.1-201ENST00000365628 92 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 SNORA70F-201ENST00000384142 135 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 RPS16P5-201ENST00000406501 404 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 MIR1183-201ENST00000408856 89 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN1BQ07699 AC106883.1-201ENST00000418805 562 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 CHIAP3-201ENST00000423668 1133 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 USP9YP11-201ENST00000427537 717 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 USP9YP9-201ENST00000429406 715 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC011998.1-201ENST00000433403 117 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.68□□□□□ -1.82
SCN1BQ07699 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 Z82190.1-201ENST00000454534 490 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 RPL18AP17-201ENST00000455326 198 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 SUMO2P2-201ENST00000456482 255 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 MTND2P28-201ENST00000457540 1044 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN1BQ07699 RN7SL481P-201ENST00000477764 299 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN1BQ07699 AC090453.1-201ENST00000495560 436 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 NIPA2P2-201ENST00000496376 1083 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 BNIP3P41-201ENST00000503774 571 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC114981.1-201ENST00000503897 678 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC093720.1-201ENST00000505681 714 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 KLHL2P1-201ENST00000508691 521 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC108064.1-201ENST00000513791 460 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 SCARNA1-201ENST00000517138 166 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 IGKV1-32-201ENST00000519290 311 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN1BQ07699 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN1BQ07699 SNRPGP16-201ENST00000533275 226 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN1BQ07699 AC063950.1-201ENST00000552036 308 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN1BQ07699 AP001330.4-201ENST00000604350 154 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC024940.4-201ENST00000605507 246 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AL451074.6-201ENST00000608512 729 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AC131235.4-201ENST00000609288 620 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN1BQ07699 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.68□□□□□ -1.82
SCN1BQ07699 AL773545.4-201ENST00000637262 310 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 FP325313.1-201ENST00000638228 703 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 AL513478.4-201ENST00000641636 310 ntBASIC3.68□□□□□ -1.82
SCN1BQ07699 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCN1BQ07699 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SCN1BQ07699 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SCN1BQ07699 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.68□□□□□ -1.82
SCN1BQ07699 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN1BQ07699 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 IPO8P1-201ENST00000455509 3109 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
SCN1BQ07699 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 MIR3065-201ENST00000390137 79 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 CYCSP45-201ENST00000402289 315 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN1BQ07699 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AL513175.2-201ENST00000422071 443 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.67□□□□□ -1.82
SCN1BQ07699 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.67□□□□□ -1.82
SCN1BQ07699 DUTP6-201ENST00000425573 462 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 AL590233.1-201ENST00000430017 456 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 USP9YP24-201ENST00000434374 697 ntBASIC3.67□□□□□ -1.82
SCN1BQ07699 SNORA71B-202ENST00000439232 272 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms