Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
HSPG2P98160 RPS6P2-201ENST00000454208 705 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC146507.2-201ENST00000460608 476 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 IGHV3-63-201ENST00000518422 341 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC104027.1-201ENST00000521887 300 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AP001317.1-201ENST00000531194 960 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC011602.1-201ENST00000546484 331 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 CKS1BP1-201ENST00000555221 240 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC1.7□□□□□ -2.14
HSPG2P98160 AC004696.1-201ENST00000614345 607 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.7□□□□□ -2.14
HSPG2P98160 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.7□□□□□ -2.14
HSPG2P98160 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.7□□□□□ -2.14
HSPG2P98160 HMGB3P6-201ENST00000444896 598 ntBASIC1.7□□□□□ -2.14
HSPG2P98160 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.7□□□□□ -2.14
HSPG2P98160 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
HSPG2P98160 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC1.69□□□□□ -2.14
HSPG2P98160 HMGN1P5-201ENST00000448591 263 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.69□□□□□ -2.14
HSPG2P98160 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.69□□□□□ -2.14
HSPG2P98160 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC1.69□□□□□ -2.14
HSPG2P98160 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 RPS12P5-201ENST00000423449 371 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 HIGD1AP2-201ENST00000446367 280 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 RPL7P52-201ENST00000449200 742 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 ISCA1P3-201ENST00000577104 373 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 RANP7-201ENST00000418085 644 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 AC008716.1-201ENST00000511084 513 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 ARL2BPP6-201ENST00000512757 439 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 MAL2-203ENST00000534619 578 ntTSL 4 BASIC1.69□□□□□ -2.14
HSPG2P98160 AP002770.2-201ENST00000543613 532 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 AC103968.1-201ENST00000557841 573 ntBASIC1.69□□□□□ -2.14
HSPG2P98160 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.69□□□□□ -2.14
HSPG2P98160 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
HSPG2P98160 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
HSPG2P98160 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
HSPG2P98160 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HSPG2P98160 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HSPG2P98160 RNU1-89P-201ENST00000384592 164 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC1.68□□□□□ -2.14
HSPG2P98160 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC1.68□□□□□ -2.14
HSPG2P98160 RPL7P10-201ENST00000417407 739 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.68□□□□□ -2.14
HSPG2P98160 RPS29P6-201ENST00000438196 145 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 OR5BN1P-201ENST00000532955 829 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 AC009101.1-201ENST00000568135 242 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 AC012020.1-201ENST00000624541 1728 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.68□□□□□ -2.14
HSPG2P98160 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC1.68□□□□□ -2.14
HSPG2P98160 OR4G1P-202ENST00000641173 1788 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 Y_RNA.338-201ENST00000365320 114 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 SNORA64-201ENST00000384674 134 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 MIR592-201ENST00000384959 97 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 PTP4A1P5-201ENST00000420305 455 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC1.68□□□□□ -2.14
HSPG2P98160 OR4G11P-201ENST00000492842 939 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.68□□□□□ -2.14
HSPG2P98160 AC008507.1-201ENST00000587506 734 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 AC233280.2-201ENST00000603917 1070 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 MAPK10-373ENST00000641983 6772 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 DDX18P3-201ENST00000404856 2007 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
HSPG2P98160 AL592494.2-201ENST00000425455 1548 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 Y_RNA.269-201ENST00000364685 89 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 SNORA70E-201ENST00000384492 135 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 RPL32P35-201ENST00000415214 394 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 AC010881.1-201ENST00000433830 235 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 RPL21P99-201ENST00000480369 423 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 SCGB1D5P-201ENST00000515134 247 ntBASIC1.68□□□□□ -2.14
HSPG2P98160 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HSPG2P98160 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HSPG2P98160 AC019080.5-201ENST00000624891 757 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms