Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC104837.2-201ENST00000427236 424 ntBASIC5.14□□□□□ -1.59
YBX1P67809 IPO7P1-201ENST00000442031 636 ntBASIC5.14□□□□□ -1.59
YBX1P67809 FAM103A2P-201ENST00000444122 354 ntBASIC5.14□□□□□ -1.59
YBX1P67809 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.14□□□□□ -1.59
YBX1P67809 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 AC245028.2-201ENST00000458673 253 ntBASIC5.14□□□□□ -1.59
YBX1P67809 RPS15AP17-201ENST00000470598 390 ntBASIC5.14□□□□□ -1.59
YBX1P67809 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.14□□□□□ -1.59
YBX1P67809 RPL7P6-201ENST00000480903 738 ntBASIC5.14□□□□□ -1.59
YBX1P67809 RPS4XP18-201ENST00000495480 763 ntBASIC5.14□□□□□ -1.59
YBX1P67809 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.14□□□□□ -1.59
YBX1P67809 AC010587.1-201ENST00000505809 469 ntBASIC5.14□□□□□ -1.59
YBX1P67809 NPM1P41-201ENST00000512920 831 ntBASIC5.14□□□□□ -1.59
YBX1P67809 EIF3KP3-201ENST00000514461 639 ntBASIC5.14□□□□□ -1.59
YBX1P67809 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 BX510359.5-201ENST00000515651 304 ntBASIC5.14□□□□□ -1.59
YBX1P67809 RNU4-49P-201ENST00000516080 140 ntBASIC5.14□□□□□ -1.59
YBX1P67809 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.14□□□□□ -1.59
YBX1P67809 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.14□□□□□ -1.59
YBX1P67809 HIGD1AP5-201ENST00000529959 259 ntBASIC5.14□□□□□ -1.59
YBX1P67809 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.14□□□□□ -1.59
YBX1P67809 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 AL389895.1-201ENST00000554127 252 ntBASIC5.14□□□□□ -1.59
YBX1P67809 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.14□□□□□ -1.59
YBX1P67809 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
YBX1P67809 MIR4742-201ENST00000581069 85 ntBASIC5.14□□□□□ -1.59
YBX1P67809 MIR3668-201ENST00000582138 75 ntBASIC5.14□□□□□ -1.59
YBX1P67809 RN7SL356P-201ENST00000582228 248 ntBASIC5.14□□□□□ -1.59
YBX1P67809 PRPF19P1-201ENST00000584766 898 ntBASIC5.14□□□□□ -1.59
YBX1P67809 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.14□□□□□ -1.59
YBX1P67809 RPL26P30-202ENST00000602923 645 ntBASIC5.14□□□□□ -1.59
YBX1P67809 AC087763.1-201ENST00000603391 286 ntBASIC5.14□□□□□ -1.59
YBX1P67809 AL354950.2-201ENST00000617939 290 ntBASIC5.14□□□□□ -1.59
YBX1P67809 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.14□□□□□ -1.59
YBX1P67809 AL359922.3-201ENST00000624779 1670 ntBASIC5.14□□□□□ -1.59
YBX1P67809 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
YBX1P67809 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.14□□□□□ -1.59
YBX1P67809 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
YBX1P67809 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
YBX1P67809 LARP1BP1-201ENST00000506036 1359 ntBASIC5.14□□□□□ -1.59
YBX1P67809 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
YBX1P67809 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
YBX1P67809 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
YBX1P67809 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 RIOK3P1-201ENST00000418778 1528 ntBASIC5.13□□□□□ -1.59
YBX1P67809 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.13□□□□□ -1.59
YBX1P67809 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 RN7SKP115-201ENST00000363177 317 ntBASIC5.13□□□□□ -1.59
YBX1P67809 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.13□□□□□ -1.59
YBX1P67809 RNU6-43P-201ENST00000384302 107 ntBASIC5.13□□□□□ -1.59
YBX1P67809 RNU6-463P-201ENST00000384340 107 ntBASIC5.13□□□□□ -1.59
YBX1P67809 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 AL591416.1-201ENST00000404015 867 ntBASIC5.13□□□□□ -1.59
YBX1P67809 RNU6-1148P-201ENST00000410992 104 ntBASIC5.13□□□□□ -1.59
YBX1P67809 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
YBX1P67809 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.13□□□□□ -1.59
YBX1P67809 AL353777.1-201ENST00000425552 326 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.13□□□□□ -1.59
YBX1P67809 AL031663.1-201ENST00000437445 219 ntBASIC5.13□□□□□ -1.59
YBX1P67809 PTMAP6-201ENST00000439110 327 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.13□□□□□ -1.59
YBX1P67809 GAPDHP25-201ENST00000447061 1001 ntBASIC5.13□□□□□ -1.59
YBX1P67809 NOP56P2-201ENST00000447491 769 ntBASIC5.13□□□□□ -1.59
YBX1P67809 GAPDHP14-201ENST00000450472 937 ntBASIC5.13□□□□□ -1.59
YBX1P67809 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.13□□□□□ -1.59
YBX1P67809 RPS15AP1-201ENST00000457423 391 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.13□□□□□ -1.59
YBX1P67809 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.13□□□□□ -1.59
YBX1P67809 COPS8P2-201ENST00000473228 627 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC010301.1-201ENST00000473936 355 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC090096.1-201ENST00000489168 390 ntBASIC5.13□□□□□ -1.59
YBX1P67809 EIF4EP3-201ENST00000498782 656 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC093677.1-201ENST00000514414 678 ntBASIC5.13□□□□□ -1.59
YBX1P67809 Y_RNA.691-201ENST00000516611 103 ntBASIC5.13□□□□□ -1.59
YBX1P67809 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 AC123904.2-201ENST00000548059 300 ntBASIC5.13□□□□□ -1.59
YBX1P67809 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.13□□□□□ -1.59
YBX1P67809 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.13□□□□□ -1.59
YBX1P67809 HMGB1P6-201ENST00000569046 646 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AC005341.1-201ENST00000571086 708 ntBASIC5.13□□□□□ -1.59
YBX1P67809 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 AC121334.2-201ENST00000605387 271 ntBASIC5.13□□□□□ -1.59
YBX1P67809 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.13□□□□□ -1.59
YBX1P67809 AL158196.1-201ENST00000616786 434 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms