Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO4P61968 MIR6864-201ENST00000617935 70 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.41□□□□□ -1.86
LMO4P61968 AC092192.1-201ENST00000633154 1018 ntBASIC3.41□□□□□ -1.86
LMO4P61968 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.41□□□□□ -1.86
LMO4P61968 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LMO4P61968 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LMO4P61968 ZNF833P-201ENST00000424938 1494 ntBASIC3.41□□□□□ -1.86
LMO4P61968 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
LMO4P61968 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.86
LMO4P61968 LINC01109-201ENST00000603837 3081 ntBASIC3.4□□□□□ -1.86
LMO4P61968 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
LMO4P61968 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LMO4P61968 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.4□□□□□ -1.86
LMO4P61968 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC3.4□□□□□ -1.86
LMO4P61968 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
LMO4P61968 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
LMO4P61968 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LMO4P61968 IL6STP1-201ENST00000346911 1020 ntBASIC3.4□□□□□ -1.87
LMO4P61968 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LMO4P61968 Y_RNA.3-201ENST00000362331 103 ntBASIC3.4□□□□□ -1.87
LMO4P61968 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LMO4P61968 OR1L1-202ENST00000373686 1083 ntBASIC3.4□□□□□ -1.87
LMO4P61968 MT-TH-201ENST00000387441 69 ntBASIC3.4□□□□□ -1.87
LMO4P61968 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LMO4P61968 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LMO4P61968 RNU4-6P-201ENST00000410804 122 ntBASIC3.4□□□□□ -1.87
LMO4P61968 RNU6-272P-201ENST00000411028 104 ntBASIC3.4□□□□□ -1.87
LMO4P61968 ELOCP17-201ENST00000414751 326 ntBASIC3.4□□□□□ -1.87
LMO4P61968 PAICSP7-201ENST00000419829 962 ntBASIC3.4□□□□□ -1.87
LMO4P61968 MTND4LP11-201ENST00000422184 280 ntBASIC3.4□□□□□ -1.87
LMO4P61968 MTCYBP5-201ENST00000423752 1135 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC073335.1-201ENST00000427776 363 ntBASIC3.4□□□□□ -1.87
LMO4P61968 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.4□□□□□ -1.87
LMO4P61968 AC234064.1-201ENST00000436312 247 ntBASIC3.4□□□□□ -1.87
LMO4P61968 GTF2IP7-202ENST00000436677 309 ntBASIC3.4□□□□□ -1.87
LMO4P61968 RPS29P7-201ENST00000439662 171 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 AC004865.1-201ENST00000442276 1003 ntBASIC3.4□□□□□ -1.87
LMO4P61968 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.4□□□□□ -1.87
LMO4P61968 MTND4P18-201ENST00000447010 465 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO4P61968 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO4P61968 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 AC079804.1-201ENST00000461922 436 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AL024509.2-201ENST00000493462 493 ntBASIC3.4□□□□□ -1.87
LMO4P61968 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.4□□□□□ -1.87
LMO4P61968 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO4P61968 HSPE1P23-201ENST00000509838 286 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC023632.1-201ENST00000518463 375 ntBASIC3.4□□□□□ -1.87
LMO4P61968 IGJP1-201ENST00000522682 475 ntBASIC3.4□□□□□ -1.87
LMO4P61968 PTP4A1P6-201ENST00000531034 478 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC092747.2-201ENST00000545069 983 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO4P61968 AC074029.1-201ENST00000552531 1044 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC044913.1-201ENST00000557200 430 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC126323.6-202ENST00000568092 3511 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO4P61968 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LMO4P61968 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LMO4P61968 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.4□□□□□ -1.87
LMO4P61968 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 WISP1-OT1-201ENST00000602893 642 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC115621.1-201ENST00000604653 858 ntBASIC3.4□□□□□ -1.87
LMO4P61968 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 AC068944.2-201ENST00000610373 403 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC008083.4-201ENST00000615076 444 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC121761.2-201ENST00000617300 689 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AL607023.1-201ENST00000620045 248 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC022509.4-201ENST00000621404 572 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC009878.1-201ENST00000621819 340 ntBASIC3.4□□□□□ -1.87
LMO4P61968 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
LMO4P61968 AC008785.1-201ENST00000624475 456 ntBASIC3.4□□□□□ -1.87
LMO4P61968 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 AF001550.2-201ENST00000636643 217 ntBASIC3.4□□□□□ -1.87
LMO4P61968 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LMO4P61968 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
LMO4P61968 ERCC6-202ENST00000374127 1782 ntBASIC3.4□□□□□ -1.87
LMO4P61968 AC090229.1-201ENST00000590983 1609 ntBASIC3.4□□□□□ -1.87
LMO4P61968 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.4□□□□□ -1.87
LMO4P61968 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LMO4P61968 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.39□□□□□ -1.87
LMO4P61968 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.39□□□□□ -1.87
LMO4P61968 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LMO4P61968 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms